Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.22□□□□□ -1.41
CUX2O14529 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CUX2O14529 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.22□□□□□ -1.41
CUX2O14529 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CUX2O14529 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.22□□□□□ -1.41
CUX2O14529 RNA5SP52-201ENST00000362448 134 ntBASIC6.22□□□□□ -1.41
CUX2O14529 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUX2O14529 RNA5SP247-201ENST00000411181 105 ntBASIC6.22□□□□□ -1.41
CUX2O14529 AL513175.1-201ENST00000431492 780 ntBASIC6.22□□□□□ -1.41
CUX2O14529 SNORA71B-202ENST00000439232 272 ntBASIC6.22□□□□□ -1.41
CUX2O14529 RPS3AP43-201ENST00000479743 781 ntBASIC6.22□□□□□ -1.41
CUX2O14529 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.22□□□□□ -1.41
CUX2O14529 AL121603.1-201ENST00000553815 142 ntBASIC6.22□□□□□ -1.41
CUX2O14529 AC068020.1-201ENST00000594215 661 ntBASIC6.22□□□□□ -1.41
CUX2O14529 MIR7111-201ENST00000619751 72 ntBASIC6.22□□□□□ -1.41
CUX2O14529 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CUX2O14529 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.21□□□□□ -1.41
CUX2O14529 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.21□□□□□ -1.41
CUX2O14529 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CUX2O14529 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC6.21□□□□□ -1.42
CUX2O14529 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CUX2O14529 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CUX2O14529 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CUX2O14529 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CUX2O14529 MRPS33P4-201ENST00000434892 317 ntBASIC6.21□□□□□ -1.42
CUX2O14529 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.21□□□□□ -1.42
CUX2O14529 TPTE2P3-201ENST00000441562 1189 ntBASIC6.21□□□□□ -1.42
CUX2O14529 AL513124.1-201ENST00000450410 614 ntBASIC6.21□□□□□ -1.42
CUX2O14529 RPL7P48-201ENST00000461513 746 ntBASIC6.21□□□□□ -1.42
CUX2O14529 RPL31P61-201ENST00000496160 376 ntBASIC6.21□□□□□ -1.42
CUX2O14529 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.21□□□□□ -1.42
CUX2O14529 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.21□□□□□ -1.42
CUX2O14529 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CUX2O14529 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.2□□□□□ -1.42
CUX2O14529 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CUX2O14529 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC6.2□□□□□ -1.42
CUX2O14529 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 RNU4-82P-201ENST00000362443 140 ntBASIC6.2□□□□□ -1.42
CUX2O14529 GNG5P5-201ENST00000420444 220 ntBASIC6.2□□□□□ -1.42
CUX2O14529 SETP9-201ENST00000423837 832 ntBASIC6.2□□□□□ -1.42
CUX2O14529 AC239809.1-201ENST00000450470 217 ntBASIC6.2□□□□□ -1.42
CUX2O14529 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.2□□□□□ -1.42
CUX2O14529 AL133477.1-201ENST00000457472 514 ntBASIC6.2□□□□□ -1.42
CUX2O14529 RN7SL585P-201ENST00000470538 280 ntBASIC6.2□□□□□ -1.42
CUX2O14529 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.2□□□□□ -1.42
CUX2O14529 AP005262.1-201ENST00000582646 997 ntBASIC6.2□□□□□ -1.42
CUX2O14529 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC6.2□□□□□ -1.42
CUX2O14529 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC6.2□□□□□ -1.42
CUX2O14529 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CUX2O14529 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.2□□□□□ -1.42
CUX2O14529 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CUX2O14529 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUX2O14529 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.19□□□□□ -1.42
CUX2O14529 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.19□□□□□ -1.42
CUX2O14529 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUX2O14529 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CUX2O14529 OTUD4P1-201ENST00000237841 3067 ntBASIC6.19□□□□□ -1.42
CUX2O14529 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.19□□□□□ -1.42
CUX2O14529 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CUX2O14529 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
CUX2O14529 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.19□□□□□ -1.42
CUX2O14529 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CUX2O14529 MIR422A-201ENST00000362286 90 ntBASIC6.19□□□□□ -1.42
CUX2O14529 AL139281.1-201ENST00000422120 335 ntBASIC6.19□□□□□ -1.42
CUX2O14529 NPM1P13-201ENST00000452663 865 ntBASIC6.19□□□□□ -1.42
CUX2O14529 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.19□□□□□ -1.42
CUX2O14529 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.19□□□□□ -1.42
CUX2O14529 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.19□□□□□ -1.42
CUX2O14529 AC004024.1-201ENST00000549244 247 ntBASIC6.19□□□□□ -1.42
CUX2O14529 AC069209.1-201ENST00000619282 651 ntBASIC6.19□□□□□ -1.42
CUX2O14529 CEP170P1-201ENST00000502249 4587 ntBASIC6.19□□□□□ -1.42
CUX2O14529 AC021755.1-201ENST00000559747 1447 ntBASIC6.19□□□□□ -1.42
CUX2O14529 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CUX2O14529 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CUX2O14529 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CUX2O14529 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CUX2O14529 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CUX2O14529 AL136131.1-201ENST00000406079 803 ntBASIC6.18□□□□□ -1.42
CUX2O14529 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.18□□□□□ -1.42
CUX2O14529 AC011742.1-201ENST00000431448 434 ntBASIC6.18□□□□□ -1.42
CUX2O14529 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC6.18□□□□□ -1.42
CUX2O14529 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.18□□□□□ -1.42
CUX2O14529 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.18□□□□□ -1.42
CUX2O14529 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.18□□□□□ -1.42
CUX2O14529 AC067852.4-201ENST00000590314 478 ntBASIC6.18□□□□□ -1.42
CUX2O14529 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.18□□□□□ -1.42
CUX2O14529 AL669942.2-201ENST00000620352 697 ntBASIC6.18□□□□□ -1.42
CUX2O14529 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CUX2O14529 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
CUX2O14529 AC007390.2-201ENST00000606229 3803 ntBASIC6.17□□□□□ -1.42
CUX2O14529 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CUX2O14529 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms