Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 NEAT1-202ENST00000501122 22743 ntBASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.63□□□□□ -1.67
RAI2Q9Y5P3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RNU6-543P-201ENST00000362576 108 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RNU6-1339P-201ENST00000363574 91 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 SNORA62.3-201ENST00000365110 153 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 SFR1P1-201ENST00000403720 688 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AL356131.1-201ENST00000405826 414 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RN7SKP222-201ENST00000410651 315 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 SETP15-201ENST00000412724 337 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 Z74021.1-201ENST00000423610 407 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC022022.1-201ENST00000430304 178 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MOB1AP1-201ENST00000430903 535 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC117522.2-201ENST00000510049 657 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RNU5A-4P-201ENST00000516588 111 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MTCO1P47-201ENST00000523889 1271 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AP001781.1-201ENST00000530977 207 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AL354943.1-201ENST00000572103 781 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MTCO1P40-201ENST00000574371 625 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AP005119.2-201ENST00000579735 1105 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC022662.1-201ENST00000580252 331 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MRPS35P3-201ENST00000603189 709 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 CASC19-284ENST00000642142 1868 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 AL672167.1-203ENST00000641299 2975 ntBASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.62□□□□□ -1.67
RAI2Q9Y5P3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 RLIMP2-201ENST00000427891 1563 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 AC019072.1-201ENST00000604535 1551 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 AC138393.1-206ENST00000540997 1886 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 RNU1-94P-201ENST00000362627 173 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 SNORA70C-201ENST00000384538 135 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 MIR137-201ENST00000385223 102 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 RNA5SP372-201ENST00000390836 115 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 OR6C69P-201ENST00000394268 893 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 ELOCP9-201ENST00000418624 239 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 OR6C64P-201ENST00000419708 825 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 TXNL1P1-201ENST00000429528 554 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 CDY14P-201ENST00000431260 1014 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 AL008629.1-201ENST00000438615 184 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 CDY12P-201ENST00000440679 1015 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 CDY13P-201ENST00000445813 1015 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 HMGB1P48-201ENST00000446155 598 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 AL929288.2-201ENST00000446368 407 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 CDY23P-201ENST00000451661 1014 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 SEPT7P3-201ENST00000455017 621 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 RPS3AP22-201ENST00000488297 769 ntBASIC4.61□□□□□ -1.67
RAI2Q9Y5P3 RPS4XP18-201ENST00000495480 763 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms