Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AL031595.2-201ENST00000624215 19071 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 RNU6-500P-201ENST00000362349 107 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC019155.1-201ENST00000382242 574 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 SNORA67-201ENST00000384423 137 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 RNU6-253P-201ENST00000384730 105 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 RNY3P10-201ENST00000384764 102 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 TAF9BP1-201ENST00000396646 746 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 USP9YP6-201ENST00000413550 854 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 MTATP6P27-201ENST00000416987 621 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC073136.2-201ENST00000417282 849 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 RBMY2KP-201ENST00000418221 992 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 CYCSP46-201ENST00000423569 204 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 TRIM60P18-201ENST00000441518 828 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 USP9YP34-201ENST00000453983 808 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 SNORD125-201ENST00000459538 96 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 MTCO2P30-201ENST00000503662 364 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC073358.1-201ENST00000505671 684 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 HMGB1P44-201ENST00000508597 572 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC025465.4-201ENST00000513422 638 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 PRELID3BP4-201ENST00000515476 571 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 RNA5SP464-201ENST00000516251 108 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 RN7SKP99-201ENST00000517028 307 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 snoZ278.1-201ENST00000517059 112 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC068714.1-201ENST00000559623 800 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 MIR5708-201ENST00000579723 85 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC006116.3-201ENST00000592968 361 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC112220.3-201ENST00000605502 502 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC068276.1-201ENST00000605793 379 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC064836.2-201ENST00000609491 462 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC010133.1-201ENST00000615809 842 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC022509.4-201ENST00000621404 572 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC015871.5-202ENST00000623252 701 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AP002505.2-201ENST00000623585 696 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 AC000367.1-201ENST00000452711 1766 ntBASIC5.51□□□□□ -1.53
CD248Q9HCU0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CD248Q9HCU0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC103591.2-201ENST00000265259 766 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 RNU6-259P-201ENST00000383999 107 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AL079342.2-201ENST00000403367 482 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AL359643.1-201ENST00000404109 423 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 OR4K12P-201ENST00000406538 961 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AL139098.1-201ENST00000407291 389 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 MIR1271-201ENST00000408537 86 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 RNU6-603P-201ENST00000411403 107 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 TAF13P2-201ENST00000416876 286 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 ATP5F1P1-201ENST00000433775 569 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 HMGB3P9-201ENST00000441799 583 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AL034418.1-201ENST00000448675 860 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 PPIAP21-201ENST00000464473 501 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 TMED11P-201ENST00000479478 690 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC090071.1-201ENST00000507713 644 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 HSPE1P23-201ENST00000509838 286 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 BTG4P1-201ENST00000510421 183 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 HMGB3P13-201ENST00000511263 607 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms