Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL354984.3-201ENST00000604803 325 ntBASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 AL445222.1-201ENST00000607259 628 ntBASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 AC023043.4-201ENST00000612081 449 ntBASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 IPO8P1-201ENST00000455509 3109 ntBASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 AL157700.1-201ENST00000561973 1432 ntBASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SND1-IT1Q9HBX3 MTND4P8-201ENST00000514997 1362 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL132640.2-201ENST00000559968 1698 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL589826.1-201ENST00000340697 249 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MIR331-201ENST00000362302 94 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 SNORD113.2-201ENST00000364166 89 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 RNU6-796P-201ENST00000391086 107 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 DSTNP4-201ENST00000399472 474 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 ATP5F1P6-201ENST00000402768 767 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 RNU2-37P-201ENST00000410695 177 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL139095.3-201ENST00000419672 1203 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MTCYBP24-201ENST00000420387 1106 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 FAM204CP-201ENST00000424489 642 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC008072.1-201ENST00000434254 824 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 PTMAP6-201ENST00000439110 327 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MTCO3P43-201ENST00000440974 771 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC073648.4-201ENST00000442655 781 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL512326.1-201ENST00000443050 721 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MTCO3P20-201ENST00000454926 688 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 RPL23AP81-201ENST00000455252 467 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 OR52A4P-202ENST00000481634 799 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 RPL23AP73-201ENST00000492507 471 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC104108.1-201ENST00000509930 412 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 SETP12-201ENST00000514068 805 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 RNU2-58P-201ENST00000516403 183 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC104115.2-201ENST00000523026 687 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 OR4C2P-201ENST00000530855 1064 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC106734.1-201ENST00000568646 663 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MIR4646-201ENST00000580775 63 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC017100.2-201ENST00000584628 355 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 VN1R88P-201ENST00000596787 292 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC003001.2-201ENST00000616294 831 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL591424.2-201ENST00000617023 128 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC068870.2-201ENST00000620635 389 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AL109659.3-201ENST00000624985 950 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 OR8A1-204ENST00000642111 1145 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AC006504.1-201ENST00000562493 3666 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MAPK10-372ENST00000641954 3413 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 MTCO1P6-201ENST00000481192 1384 ntBASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.74□□□□□ -1.97
SND1-IT1Q9HBX3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SND1-IT1Q9HBX3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SND1-IT1Q9HBX3 AL592494.2-201ENST00000425455 1548 ntBASIC2.73□□□□□ -1.97
SND1-IT1Q9HBX3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.73□□□□□ -1.97
SND1-IT1Q9HBX3 SEPT7P7-201ENST00000420492 1301 ntBASIC2.73□□□□□ -1.97
SND1-IT1Q9HBX3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SND1-IT1Q9HBX3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms