Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORD60.2-201ENST00000516883 86 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AP001858.2-201ENST00000536213 601 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 MTCO3P23-201ENST00000561363 289 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 TVP23CP2-201ENST00000571473 623 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 MIR4700-201ENST00000578311 74 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AL589674.2-201ENST00000604304 337 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC107871.2-201ENST00000612894 502 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 AC024255.1-201ENST00000614376 102 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 U6.107-201ENST00000637108 79 ntBASIC7.13□□□□□ -1.27
TRIM47Q96LD4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
TRIM47Q96LD4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RNA5SP443-201ENST00000363083 132 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RNU1-49P-201ENST00000363468 159 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 SNORD8-201ENST00000363915 110 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RNU6-99P-201ENST00000364721 107 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RNU6-1032P-201ENST00000384100 107 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RPS4XP8-201ENST00000402039 771 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RNA5SP156-201ENST00000410250 110 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 USP24P1-201ENST00000433802 779 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 PPIAP10-201ENST00000438675 458 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 FTLP8-201ENST00000446770 267 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC104058.1-201ENST00000448028 297 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 HMGB3P22-202ENST00000451823 572 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 PCNPP5-201ENST00000452246 481 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC099563.1-201ENST00000456086 418 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RN7SL799P-201ENST00000475891 298 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC092865.4-201ENST00000477936 615 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 PCBP2P3-201ENST00000509726 843 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 COX6CP7-201ENST00000597056 208 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC116667.2-201ENST00000641075 823 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 AC132825.1-201ENST00000463573 2247 ntBASIC7.12□□□□□ -1.27
TRIM47Q96LD4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM47Q96LD4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 CDR1-202ENST00000625883 1485 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 RNU6-1263P-201ENST00000384601 106 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 MIR1305-201ENST00000408300 86 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AC010385.1-201ENST00000412374 256 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 SRIP2-201ENST00000428470 166 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 GAPDHP23-201ENST00000444823 993 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AL035666.1-201ENST00000446195 348 ntBASIC7.11□□□□□ -1.27
TRIM47Q96LD4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.11□□□□□ -1.27
TRIM47Q96LD4 NPM1P41-201ENST00000512920 831 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms