Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HPS3Q969F9 TLK1P1-201ENST00000456760 2440 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 Z95327.2-201ENST00000414579 1873 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 AL513185.3-201ENST00000433335 1300 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 RNU6-931P-201ENST00000363850 107 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 RNU6-444P-201ENST00000383988 108 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HPS3Q969F9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 TPT1P2-201ENST00000413105 503 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC010881.1-201ENST00000433830 235 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 RPS17P8-201ENST00000434525 335 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 MTCYBP3-201ENST00000445588 1137 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 RSL24D1P3-201ENST00000449255 495 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 AC108463.1-201ENST00000450258 347 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 RPS3AP43-201ENST00000479743 781 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 RNU6-232P-201ENST00000517144 64 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 RNU6-1261P-201ENST00000517194 104 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 AL390726.5-202ENST00000564800 256 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 OR1F2P-201ENST00000570470 933 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 RN7SL435P-201ENST00000584418 282 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.33□□□□□ -1.56
HPS3Q969F9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.33□□□□□ -1.56
HPS3Q969F9 MIR6820-201ENST00000611508 62 ntBASIC5.33□□□□□ -1.56
HPS3Q969F9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
HPS3Q969F9 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HPS3Q969F9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HPS3Q969F9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HPS3Q969F9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.32□□□□□ -1.56
HPS3Q969F9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HPS3Q969F9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HPS3Q969F9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HPS3Q969F9 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AC103591.2-201ENST00000265259 766 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 Y_RNA.25-201ENST00000362528 102 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 RN7SKP103-201ENST00000363848 320 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 Y_RNA.408-201ENST00000383987 102 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 RNU6-178P-201ENST00000384631 104 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HPS3Q969F9 MTCO3P31-201ENST00000405526 789 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 Y_RNA.625-201ENST00000411256 107 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC008280.1-201ENST00000418851 412 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AL390023.1-201ENST00000428836 262 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 IFNNP1-201ENST00000429219 553 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC005345.1-201ENST00000431868 217 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 PRPF38AP2-201ENST00000438179 851 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.32□□□□□ -1.56
HPS3Q969F9 OR52J1P-201ENST00000450596 932 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AC091685.2-201ENST00000454924 864 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 MTCO3P11-201ENST00000455103 774 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.32□□□□□ -1.56
HPS3Q969F9 BZW1P2-201ENST00000473537 826 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 RNA5SP228-201ENST00000516232 133 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 SNORA48.10-201ENST00000516965 160 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC027309.2-201ENST00000520566 192 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 ARL2BPP5-201ENST00000523141 481 ntBASIC5.32□□□□□ -1.56
HPS3Q969F9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.32□□□□□ -1.56
HPS3Q969F9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms