Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP001160.4-201ENST00000596971 382 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC009237.15-201ENST00000610252 501 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC068722.2-201ENST00000618734 544 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RHBDL3P58872 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RHBDL3P58872 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RHBDL3P58872 Z99496.1-201ENST00000469424 1477 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.44□□□□□ -1.54
RHBDL3P58872 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RHBDL3P58872 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.43□□□□□ -1.54
RHBDL3P58872 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AL136164.3-201ENST00000624429 3978 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RHBDL3P58872 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 MIR153-1-201ENST00000384914 90 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 MTCO2P8-201ENST00000412213 658 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 MTATP6P20-201ENST00000414147 562 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 RAC1P8-201ENST00000427086 527 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 Z93242.1-201ENST00000427102 353 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 RPS29P17-201ENST00000430795 166 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.43□□□□□ -1.54
RHBDL3P58872 RPL23AP43-201ENST00000446445 471 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 AC104651.2-201ENST00000447549 528 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 AC112492.1-201ENST00000449607 712 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 RPL37P6-202ENST00000464216 403 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AC093755.1-201ENST00000512950 1023 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 OR10V3P-201ENST00000525712 725 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.43□□□□□ -1.54
RHBDL3P58872 AC069366.1-201ENST00000583159 838 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.43□□□□□ -1.54
RHBDL3P58872 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RHBDL3P58872 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 CPHL1P-201ENST00000461341 3407 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDL3P58872 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDL3P58872 MIR217-201ENST00000384817 110 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 MIR708-201ENST00000390708 88 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 ENSAP1-201ENST00000392855 326 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC073264.1-201ENST00000411508 416 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AL139095.3-201ENST00000419672 1203 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 AC004975.1-201ENST00000428733 208 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDL3P58872 GTF2IP7-202ENST00000436677 309 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDL3P58872 USP9YP22-201ENST00000438971 294 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RHBDL3P58872 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDL3P58872 RPL29P29-201ENST00000448725 423 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC109327.1-201ENST00000471666 403 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDL3P58872 RN7SL41P-201ENST00000476144 297 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 TRAV31-201ENST00000502780 342 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 KLRA1P-201ENST00000503499 986 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC113430.1-201ENST00000506872 718 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 RN7SKP21-201ENST00000516503 220 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDL3P58872 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.42□□□□□ -1.54
RHBDL3P58872 OR8L1P-201ENST00000534005 955 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 LSM6P2-201ENST00000552208 177 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC015912.2-201ENST00000571053 181 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 MTND1P8-201ENST00000571424 950 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 MIR3912-201ENST00000577566 105 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC069545.1-201ENST00000605671 358 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.42□□□□□ -1.54
RHBDL3P58872 AP000240.1-201ENST00000609910 452 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AL138478.1-201ENST00000612252 832 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 MIR6716-201ENST00000613413 80 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 AC015914.2-201ENST00000618167 288 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 MIR6891-201ENST00000618788 93 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.42□□□□□ -1.54
RHBDL3P58872 AC026634.1-201ENST00000634369 198 ntBASIC5.42□□□□□ -1.54
RHBDL3P58872 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDL3P58872 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.42□□□□□ -1.54
RHBDL3P58872 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms