Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC079741.1-201ENST00000321498 212 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 RNU6-839P-201ENST00000363347 108 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 RNA5SP505-201ENST00000364748 108 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
CLDN20P56880 RNU6-398P-201ENST00000384143 109 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 RNU6-1151P-201ENST00000384684 107 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AL590762.2-201ENST00000395798 571 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 RPS16P5-201ENST00000406501 404 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AL008987.1-201ENST00000415528 237 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC140479.3-201ENST00000418944 1126 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN20P56880 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 RPL21P43-201ENST00000425440 472 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN20P56880 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN20P56880 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC004938.1-201ENST00000438468 308 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 USP9YP22-201ENST00000438971 294 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 CEACAMP6-201ENST00000452007 574 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AL513533.1-201ENST00000453728 415 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN20P56880 RPS26P28-201ENST00000470806 348 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 MTND2P14-201ENST00000482139 351 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN20P56880 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC093755.1-201ENST00000512950 1023 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 RNU5A-4P-201ENST00000516588 111 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 AC069240.1-201ENST00000548774 375 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 MRPS36P5-201ENST00000551909 298 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC105129.1-201ENST00000560250 297 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN20P56880 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN20P56880 AC008751.2-201ENST00000597885 980 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN20P56880 MRPS35P3-201ENST00000603189 709 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AL390816.3-201ENST00000604527 1066 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AP003973.1-201ENST00000604639 691 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC092954.1-201ENST00000609121 445 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC004908.3-201ENST00000610248 625 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC100847.1-201ENST00000611316 481 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC107075.1-201ENST00000613695 314 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC123768.4-201ENST00000616244 701 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC022509.4-201ENST00000621404 572 ntBASIC4.23□□□□□ -1.73
CLDN20P56880 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN20P56880 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLDN20P56880 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN20P56880 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 AL450326.2-201ENST00000421913 1962 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 RNU6-560P-201ENST00000364007 108 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 Y_RNA.465-201ENST00000384293 102 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 MIR217-201ENST00000384817 110 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 MIR192-201ENST00000384915 110 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 MIR921-201ENST00000401133 56 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN20P56880 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 RPL7P57-201ENST00000423238 740 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 GTF2IP23-201ENST00000423746 351 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 RPL7P34-201ENST00000433316 712 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AL359265.2-201ENST00000434367 631 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 COX7BP2-201ENST00000437976 242 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 PPIAP17-201ENST00000438507 471 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC004865.1-201ENST00000442276 1003 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 HMGB1P48-201ENST00000446155 598 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 H2AFZP5-201ENST00000446960 382 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC108463.1-201ENST00000450258 347 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 RPL23AP65-201ENST00000475608 468 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN20P56880 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC048346.1-201ENST00000510247 144 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 RNA5SP228-201ENST00000516232 133 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms