Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 RNA5SP151-201ENST00000365632 117 ntBASIC4.24□□□□□ -1.73
PDX1P52945 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 AC093719.1-202ENST00000392735 373 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AL583835.1-201ENST00000399570 407 ntBASIC4.24□□□□□ -1.73
PDX1P52945 RNU6-77P-201ENST00000410554 91 ntBASIC4.24□□□□□ -1.73
PDX1P52945 NRBF2P2-201ENST00000413087 861 ntBASIC4.24□□□□□ -1.73
PDX1P52945 RPS7P9-201ENST00000414704 586 ntBASIC4.24□□□□□ -1.73
PDX1P52945 LIPT1P1-201ENST00000415870 1186 ntBASIC4.24□□□□□ -1.73
PDX1P52945 RPL36AP36-201ENST00000418616 301 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.24□□□□□ -1.73
PDX1P52945 RPL23AP38-201ENST00000423801 469 ntBASIC4.24□□□□□ -1.73
PDX1P52945 GTF2IP3-201ENST00000433887 494 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AL132765.1-201ENST00000434165 553 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 AL450263.2-201ENST00000439400 589 ntBASIC4.24□□□□□ -1.73
PDX1P52945 RPS7P5-201ENST00000441482 581 ntBASIC4.24□□□□□ -1.73
PDX1P52945 HSFY6P-201ENST00000445573 403 ntBASIC4.24□□□□□ -1.73
PDX1P52945 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.24□□□□□ -1.73
PDX1P52945 AL031313.1-201ENST00000448435 256 ntBASIC4.24□□□□□ -1.73
PDX1P52945 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.24□□□□□ -1.73
PDX1P52945 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.24□□□□□ -1.73
PDX1P52945 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 AC020593.1-201ENST00000507399 299 ntBASIC4.24□□□□□ -1.73
PDX1P52945 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.24□□□□□ -1.73
PDX1P52945 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.24□□□□□ -1.73
PDX1P52945 RNU6-416P-201ENST00000516265 103 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.24□□□□□ -1.73
PDX1P52945 CYCSP28-201ENST00000534284 321 ntBASIC4.24□□□□□ -1.73
PDX1P52945 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 OR8R1P-201ENST00000543943 764 ntBASIC4.24□□□□□ -1.73
PDX1P52945 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.24□□□□□ -1.73
PDX1P52945 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.24□□□□□ -1.73
PDX1P52945 MTCYBP23-201ENST00000558717 1102 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AL158211.1-201ENST00000566763 763 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AC027455.1-201ENST00000574104 594 ntBASIC4.24□□□□□ -1.73
PDX1P52945 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.24□□□□□ -1.73
PDX1P52945 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.24□□□□□ -1.73
PDX1P52945 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 AC009948.4-201ENST00000604692 675 ntBASIC4.24□□□□□ -1.73
PDX1P52945 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 PART1_2.1-201ENST00000612397 250 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AP001005.3-201ENST00000622049 129 ntBASIC4.24□□□□□ -1.73
PDX1P52945 AC090506.2-201ENST00000624521 419 ntBASIC4.24□□□□□ -1.73
PDX1P52945 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDX1P52945 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDX1P52945 MTCO1P6-201ENST00000481192 1384 ntBASIC4.24□□□□□ -1.73
PDX1P52945 LARP1BP1-201ENST00000506036 1359 ntBASIC4.24□□□□□ -1.73
PDX1P52945 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.24□□□□□ -1.73
PDX1P52945 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 AC092435.4-201ENST00000623012 4159 ntBASIC4.23□□□□□ -1.73
PDX1P52945 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.23□□□□□ -1.73
PDX1P52945 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 RNU6-236P-201ENST00000363886 106 ntBASIC4.23□□□□□ -1.73
PDX1P52945 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 MIR23B-201ENST00000384832 97 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AL445189.1-201ENST00000405722 338 ntBASIC4.23□□□□□ -1.73
PDX1P52945 CYCSP10-201ENST00000417973 294 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.23□□□□□ -1.73
PDX1P52945 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 NANOGP5-201ENST00000424456 877 ntBASIC4.23□□□□□ -1.73
PDX1P52945 COX6CP15-201ENST00000426313 211 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 NPM1P24-201ENST00000428039 894 ntBASIC4.23□□□□□ -1.73
PDX1P52945 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.23□□□□□ -1.73
PDX1P52945 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.23□□□□□ -1.73
PDX1P52945 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 AC099063.2-201ENST00000446360 662 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 RPL23AP71-201ENST00000470966 469 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 AC091959.2-201ENST00000477363 321 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC073522.1-201ENST00000483312 377 ntBASIC4.23□□□□□ -1.73
PDX1P52945 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 DEFB109F-201ENST00000491870 277 ntBASIC4.23□□□□□ -1.73
PDX1P52945 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 AC008958.1-201ENST00000511047 682 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC010285.3-201ENST00000511668 676 ntBASIC4.23□□□□□ -1.73
PDX1P52945 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.23□□□□□ -1.73
PDX1P52945 HMGB1P19-201ENST00000517578 577 ntBASIC4.23□□□□□ -1.73
PDX1P52945 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms