Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.89□□□□□ -1.79
RORAP35398 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RORAP35398 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
RORAP35398 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RORAP35398 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RORAP35398 ASNSP1-204ENST00000641977 1664 ntBASIC3.88□□□□□ -1.79
RORAP35398 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RORAP35398 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 RN7SKP56-201ENST00000410513 331 ntBASIC3.88□□□□□ -1.79
RORAP35398 HSPE1P12-201ENST00000412576 301 ntBASIC3.88□□□□□ -1.79
RORAP35398 MTND4P11-201ENST00000417020 1058 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.88□□□□□ -1.79
RORAP35398 AC093698.1-201ENST00000423843 571 ntBASIC3.88□□□□□ -1.79
RORAP35398 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.88□□□□□ -1.79
RORAP35398 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 RPS24P8-201ENST00000431490 402 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.88□□□□□ -1.79
RORAP35398 HLA-N-201ENST00000437516 135 ntBASIC3.88□□□□□ -1.79
RORAP35398 ELOCP8-201ENST00000439309 332 ntBASIC3.88□□□□□ -1.79
RORAP35398 ELOCP15-201ENST00000442090 332 ntBASIC3.88□□□□□ -1.79
RORAP35398 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.88□□□□□ -1.79
RORAP35398 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 AC090543.1-201ENST00000492168 485 ntBASIC3.88□□□□□ -1.79
RORAP35398 HMGB1P21-201ENST00000502313 581 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.88□□□□□ -1.79
RORAP35398 AC093770.1-201ENST00000511559 571 ntBASIC3.88□□□□□ -1.79
RORAP35398 MED28P5-201ENST00000528254 438 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.88□□□□□ -1.79
RORAP35398 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.88□□□□□ -1.79
RORAP35398 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.88□□□□□ -1.79
RORAP35398 AC012414.2-201ENST00000559474 187 ntBASIC3.88□□□□□ -1.79
RORAP35398 AL360157.1-201ENST00000565962 87 ntBASIC3.88□□□□□ -1.79
RORAP35398 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.88□□□□□ -1.79
RORAP35398 MIR5684-201ENST00000585074 65 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC015911.5-201ENST00000587076 451 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC090525.3-201ENST00000605601 189 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC055764.2-201ENST00000610089 670 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC011472.4-201ENST00000615848 491 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC104820.1-201ENST00000624183 307 ntBASIC3.88□□□□□ -1.79
RORAP35398 AC034229.5-201ENST00000624258 185 ntBASIC3.88□□□□□ -1.79
RORAP35398 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
RORAP35398 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RORAP35398 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.88□□□□□ -1.79
RORAP35398 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RORAP35398 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RORAP35398 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
RORAP35398 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RORAP35398 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RORAP35398 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 SNORA60-201ENST00000362396 134 ntBASIC3.87□□□□□ -1.79
RORAP35398 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RORAP35398 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.87□□□□□ -1.79
RORAP35398 RPS20P25-201ENST00000412447 352 ntBASIC3.87□□□□□ -1.79
RORAP35398 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.87□□□□□ -1.79
RORAP35398 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.87□□□□□ -1.79
RORAP35398 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.87□□□□□ -1.79
RORAP35398 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.87□□□□□ -1.79
RORAP35398 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RORAP35398 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.87□□□□□ -1.79
RORAP35398 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.87□□□□□ -1.79
RORAP35398 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.87□□□□□ -1.79
RORAP35398 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.87□□□□□ -1.79
RORAP35398 RPL7P48-201ENST00000461513 746 ntBASIC3.87□□□□□ -1.79
RORAP35398 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 AC108157.1-201ENST00000510511 539 ntBASIC3.87□□□□□ -1.79
RORAP35398 SAP18P1-201ENST00000512058 390 ntBASIC3.87□□□□□ -1.79
RORAP35398 RNU6-760P-201ENST00000516078 97 ntBASIC3.87□□□□□ -1.79
RORAP35398 RNA5SP309-201ENST00000516670 106 ntBASIC3.87□□□□□ -1.79
RORAP35398 OR4A2P-201ENST00000527276 913 ntBASIC3.87□□□□□ -1.79
RORAP35398 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.87□□□□□ -1.79
RORAP35398 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.87□□□□□ -1.79
RORAP35398 AC091515.1-201ENST00000548110 679 ntBASIC3.87□□□□□ -1.79
RORAP35398 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.87□□□□□ -1.79
RORAP35398 AC023158.1-201ENST00000561632 1025 ntBASIC3.87□□□□□ -1.79
RORAP35398 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.87□□□□□ -1.79
RORAP35398 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 AL133247.2-201ENST00000603236 482 ntBASIC3.87□□□□□ -1.79
RORAP35398 AL049634.3-201ENST00000604968 457 ntBASIC3.87□□□□□ -1.79
RORAP35398 MIR432-201ENST00000606207 94 ntBASIC3.87□□□□□ -1.79
RORAP35398 AC064801.1-201ENST00000612025 407 ntBASIC3.87□□□□□ -1.79
RORAP35398 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RORAP35398 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RORAP35398 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RORAP35398 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RORAP35398 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
RORAP35398 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.86□□□□□ -1.79
RORAP35398 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RORAP35398 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RORAP35398 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.86□□□□□ -1.79
RORAP35398 RNA5SP167-201ENST00000365461 116 ntBASIC3.86□□□□□ -1.79
RORAP35398 RNU4-6P-201ENST00000410804 122 ntBASIC3.86□□□□□ -1.79
RORAP35398 RPL31P45-201ENST00000419532 356 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms