Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 AC130304.1-201ENST00000622942 2385 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CNOT4O95628 AC005224.3-201ENST00000584683 2140 ntBASIC5.2□□□□□ -1.58
CNOT4O95628 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.2□□□□□ -1.58
CNOT4O95628 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 MIR375-201ENST00000362103 64 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 Y_RNA.573-201ENST00000384763 105 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 MT-TD-201ENST00000387419 68 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 MTCO3P40-201ENST00000392516 676 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.19□□□□□ -1.58
CNOT4O95628 PRELID3BP11-201ENST00000414230 479 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 LINC00993-201ENST00000420453 540 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 RPS27AP14-201ENST00000422868 454 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 ELOCP14-201ENST00000428070 331 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL513175.1-201ENST00000431492 780 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 PCBP2P1-201ENST00000437262 977 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 ELOCP7-201ENST00000439968 331 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AL663074.2-201ENST00000440621 479 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 HMGB3P9-201ENST00000441799 583 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 VDAC2P4-201ENST00000452925 711 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 RNU1-88P-201ENST00000459274 128 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 COX6B1P2-201ENST00000489624 230 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.19□□□□□ -1.58
CNOT4O95628 AC108078.1-201ENST00000508073 725 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 RNA5SP135-201ENST00000517019 125 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 MTCO2P4-201ENST00000517968 247 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 IGLV2-28-201ENST00000520681 304 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 AC022404.1-201ENST00000555320 273 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.19□□□□□ -1.58
CNOT4O95628 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.19□□□□□ -1.58
CNOT4O95628 AC138915.2-201ENST00000569776 97 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 HNRNPCP4-201ENST00000571636 900 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.19□□□□□ -1.58
CNOT4O95628 BNIP3P8-201ENST00000597863 560 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AL359535.1-201ENST00000612100 1087 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AC112204.3-201ENST00000623822 332 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 AC079776.5-201ENST00000641920 211 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CNOT4O95628 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CNOT4O95628 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 DCAF13P1-201ENST00000495256 1330 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 OR5BR1P-201ENST00000524992 1330 ntBASIC5.19□□□□□ -1.58
CNOT4O95628 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNOT4O95628 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CNOT4O95628 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 AL022311.1-201ENST00000623726 19416 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.18□□□□□ -1.58
CNOT4O95628 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CNOT4O95628 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CNOT4O95628 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNOT4O95628 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.18□□□□□ -1.58
CNOT4O95628 AL512646.1-201ENST00000269395 1077 ntBASIC5.18□□□□□ -1.58
CNOT4O95628 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CNOT4O95628 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms