Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AL139418.1-201ENST00000613613 177 ntBASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AC121761.2-201ENST00000617300 689 ntBASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AL731566.2-201ENST00000618971 317 ntBASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AC068620.4-201ENST00000636730 1182 ntBASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AL136164.3-201ENST00000624429 3978 ntBASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 AL034370.1-201ENST00000397254 1590 ntBASIC4.74□□□□□ -1.65
TBC1D3FA6NER0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RNU6-1066P-201ENST00000363573 105 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 TMSB4XP8-201ENST00000402089 135 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RNU2-42P-201ENST00000410697 113 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 CTSL3P-202ENST00000412179 788 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 TMSB4XP6-201ENST00000415187 135 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC009302.1-201ENST00000417147 390 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC009518.2-201ENST00000418056 731 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC140479.3-201ENST00000418944 1126 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC009237.2-201ENST00000421358 284 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC011233.1-201ENST00000422812 283 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL645608.4-201ENST00000423619 154 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 TMSB4XP1-201ENST00000424567 135 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RPL37P1-201ENST00000432310 284 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL591623.2-201ENST00000449978 222 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RPL23AP15-201ENST00000450202 459 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 NF1P3-201ENST00000457709 450 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 BET1P1-201ENST00000482276 359 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC010486.3-201ENST00000511602 785 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC118465.1-201ENST00000513820 1271 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RNU6-202P-201ENST00000515998 96 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 Y_RNA.688-201ENST00000516565 95 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC008015.1-201ENST00000555505 465 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 MIR4715-201ENST00000584117 79 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL390838.2-201ENST00000602394 274 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AL031281.1-201ENST00000604049 488 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC131235.4-201ENST00000609288 620 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC100847.1-201ENST00000611316 481 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 MIR6758-201ENST00000620653 63 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC116618.1-201ENST00000634617 774 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 AC103706.2-201ENST00000638080 240 ntBASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
TBC1D3FA6NER0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TBC1D3FA6NER0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TBC1D3FA6NER0 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.72□□□□□ -1.65
TBC1D3FA6NER0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TBC1D3FA6NER0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TBC1D3FA6NER0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TBC1D3FA6NER0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms