Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 AC010615.1-201ENST00000594254 1764 ntBASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL25A1Q9BXS0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC105074.1-201ENST00000623380 3095 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC126755.2-208ENST00000327792 462 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC138969.1-213ENST00000331436 462 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 SNORA20.1-201ENST00000364790 130 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RNU6-38P-201ENST00000384085 107 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RNU6-606P-201ENST00000384721 111 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC073264.1-201ENST00000411508 416 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 SKA2P1-201ENST00000425592 390 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RPL7P29-201ENST00000437151 728 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 PRPF38AP1-201ENST00000451976 933 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 PRELID3BP1-201ENST00000457142 540 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 NF1P3-201ENST00000457709 450 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RNU6-333P-201ENST00000459117 107 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RN7SL714P-201ENST00000487050 298 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC012400.1-201ENST00000518452 381 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MIR3133-201ENST00000583157 78 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC130324.3-201ENST00000614165 542 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC091953.5-201ENST00000622919 233 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AL049780.3-201ENST00000624612 1583 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC119744.1-201ENST00000454746 1715 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AL731566.1-201ENST00000620490 1937 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AL157831.2-201ENST00000564681 3095 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 PRNCR1-201ENST00000635449 12727 ntBASIC6.38□□□□□ -1.39
COL25A1Q9BXS0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 Z97989.1-201ENST00000531702 2421 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 SPATA2P1-201ENST00000431223 2055 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC005592.1-201ENST00000566527 1640 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL021877.2-201ENST00000624442 10684 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 COL6A4P1-202ENST00000487147 4317 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.496-201ENST00000384444 101 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 SNORA48.7-201ENST00000391302 135 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL357752.1-201ENST00000412817 349 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL136133.1-201ENST00000413694 376 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 RPL35AP31-201ENST00000418340 337 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL353777.1-201ENST00000425552 326 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms