Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC005951.1-201ENST00000576706 485 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC090616.2-202ENST00000584248 222 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC006539.2-201ENST00000601729 572 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 PSMA6P4-201ENST00000603247 718 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AL390816.3-201ENST00000604527 1066 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AP003973.1-201ENST00000604639 691 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AL162431.4-201ENST00000604674 411 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AL163642.2-201ENST00000604722 1019 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC018695.5-201ENST00000605872 315 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC116651.1-201ENST00000609724 556 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC090510.2-201ENST00000617465 629 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC009237.17-201ENST00000618111 748 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC091905.4-201ENST00000623432 202 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 ASNSP1-204ENST00000641977 1664 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
VPS50Q96JG6 SALL4P2-201ENST00000423288 2910 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
VPS50Q96JG6 AC046144.1-201ENST00000478559 1853 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 Z99496.1-201ENST00000469424 1477 ntBASIC4.88□□□□□ -1.63
VPS50Q96JG6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 U3.3-201ENST00000362986 216 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RNU6-839P-201ENST00000363347 108 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RN7SKP103-201ENST00000363848 320 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RNU6-553P-201ENST00000364047 96 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RNA5SP90-201ENST00000364801 99 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 OR52E6-202ENST00000379946 954 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RNU1-106P-201ENST00000384382 164 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL161909.1-201ENST00000397390 712 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL390316.1-201ENST00000406279 553 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 OR4K12P-201ENST00000406538 961 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 MIR1182-201ENST00000408363 97 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RNU2-42P-201ENST00000410697 113 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 RNA5SP146-201ENST00000410743 123 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 ISCA1P2-201ENST00000438679 421 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 KNOP1P3-201ENST00000446933 426 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 RPL5P24-201ENST00000463742 885 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC090686.1-201ENST00000481577 749 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC091435.1-201ENST00000505442 584 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC048346.1-201ENST00000510247 144 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC002400.1-201ENST00000569310 726 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC010738.1-201ENST00000604970 987 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL445222.1-201ENST00000607259 628 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AL607023.1-201ENST00000620045 248 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC091931.1-201ENST00000623488 728 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC091965.5-201ENST00000624785 342 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 TLK1P1-201ENST00000456760 2440 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC021755.1-201ENST00000559747 1447 ntBASIC4.87□□□□□ -1.63
VPS50Q96JG6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VPS50Q96JG6 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VPS50Q96JG6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VPS50Q96JG6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 SNURFL-201ENST00000309296 343 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 RNA5SP28-201ENST00000363841 119 ntBASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VPS50Q96JG6 PRPF38AP2-201ENST00000438179 851 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 204.8 ms