Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 Y_RNA.20-201ENST00000362479 113 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RNU6-545P-201ENST00000362681 104 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RN7SKP174-201ENST00000363803 330 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 Y_RNA.214-201ENST00000364201 112 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 Y_RNA.276-201ENST00000364732 109 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 MIR558-201ENST00000384920 94 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RNA5SP474-201ENST00000391234 90 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC110754.1-201ENST00000399740 601 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RNU2-14P-201ENST00000411053 191 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 SUMO2P3-201ENST00000438311 288 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RPL36AP39-201ENST00000445859 318 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 CEACAMP10-202ENST00000495431 496 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC018645.1-201ENST00000505003 109 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RN7SKP147-201ENST00000517154 244 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 LSM3P2-201ENST00000551246 273 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC013283.1-201ENST00000557282 492 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC012433.1-201ENST00000588916 398 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 HMGB2P1-201ENST00000591146 634 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AL627230.1-201ENST00000613077 211 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 ATP5A1P2-202ENST00000616464 443 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 MIR7854-201ENST00000620068 65 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC091925.2-201ENST00000625059 256 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 U6.101-201ENST00000637707 76 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 CASC19-246ENST00000641625 1606 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 AC093909.5-201ENST00000621839 1799 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 CTAGE11P-201ENST00000451540 2353 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 AL136981.1-203ENST00000451452 3844 ntBASIC7.25□□□□□ -1.25
LRCH3Q96II8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC244517.1-201ENST00000606030 2086 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LRCH3Q96II8 RNA5SP394-201ENST00000364216 119 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 Y_RNA.274-201ENST00000364714 101 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 RNU6-338P-201ENST00000383888 105 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AL359694.1-201ENST00000403247 604 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AL136131.1-201ENST00000406079 803 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 RAC1P3-201ENST00000416129 580 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC068533.1-201ENST00000418542 415 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 RBMY1KP-201ENST00000423480 476 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 MTCO3P29-201ENST00000432119 779 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 ATP5LP2-201ENST00000440646 311 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 RPL36AP15-201ENST00000444514 266 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC133473.1-201ENST00000455173 299 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC011225.1-201ENST00000457751 369 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC116562.3-201ENST00000506136 177 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC067942.3-201ENST00000512025 362 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 RNA5SP362-201ENST00000516048 118 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC068587.5-201ENST00000528506 175 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC084783.1-201ENST00000565846 910 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 MRPS21P8-201ENST00000569196 235 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AL157899.1-201ENST00000604110 936 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 HMGB1P50-201ENST00000605814 607 ntBASIC7.24□□□□□ -1.25
LRCH3Q96II8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.24□□□□□ -1.25
LRCH3Q96II8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms