Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL356131.1-201ENST00000405826 414 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC011933.1-201ENST00000413334 321 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 RPA2P2-201ENST00000419698 796 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 OR6C64P-201ENST00000419708 825 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 USP9YP14-201ENST00000430663 563 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 PTGES3P1-201ENST00000439531 483 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 RAD23BP3-201ENST00000454157 1152 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 ATG12P2-201ENST00000456830 416 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 RNA5SP246-201ENST00000458909 119 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC116533.1-201ENST00000459748 321 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 RN7SL303P-201ENST00000469773 251 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC006517.1-201ENST00000480485 328 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC091167.1-201ENST00000492017 396 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 OR2A20P-203ENST00000498397 1268 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC021146.7-201ENST00000509604 775 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC099522.1-202ENST00000514718 367 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC010306.1-201ENST00000523223 1117 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 OR5M7P-201ENST00000526140 972 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AP000926.4-201ENST00000527351 454 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 NDUFS5P6-201ENST00000529136 295 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 MIR4277-201ENST00000578298 84 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC069366.1-201ENST00000583159 838 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 MIR3138-201ENST00000585238 82 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 RPL26P30-202ENST00000602923 645 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC121247.2-201ENST00000604776 136 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC018638.7-201ENST00000605836 1114 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AC010975.3-201ENST00000618727 978 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AP000676.3-201ENST00000623299 569 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AL133243.3-201ENST00000617415 3004 ntBASIC4.51□□□□□ -1.69
LMO3Q8TAP4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.51□□□□□ -1.69
LMO3Q8TAP4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 CR382285.2-201ENST00000624662 1495 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 ZNF849P-201ENST00000594711 1566 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC011266.1-201ENST00000624119 3569 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC104454.1-201ENST00000421341 1401 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC126755.2-208ENST00000327792 462 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC138969.1-213ENST00000331436 462 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 RNA5SP388-201ENST00000362584 119 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 U6.112-201ENST00000384129 70 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 SNORD116-12-201ENST00000384468 92 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 SNORD116-4-201ENST00000384733 96 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 RNU4-25P-201ENST00000410569 230 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 SEPT2P1-201ENST00000419651 180 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 GAPDHP49-201ENST00000421421 961 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 KCTD10P1-201ENST00000434203 625 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC073387.1-201ENST00000453261 709 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.5□□□□□ -1.69
LMO3Q8TAP4 RPS4XP6-201ENST00000477670 797 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC135999.1-201ENST00000478962 479 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 AC079203.1-201ENST00000487972 404 ntBASIC4.5□□□□□ -1.69
LMO3Q8TAP4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms