Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL512662.1-201ENST00000624850 2251 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC093909.5-201ENST00000621839 1799 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RN7SKP174-201ENST00000363803 330 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RNA5SP198-201ENST00000410376 127 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 EIF1P2-201ENST00000428233 350 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL359265.2-201ENST00000434367 631 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL645939.3-201ENST00000435408 225 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC099799.1-201ENST00000439809 192 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC243772.1-201ENST00000451620 410 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL139109.1-201ENST00000455491 297 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RPL23AP72-201ENST00000492447 435 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC090453.1-201ENST00000495560 436 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC011411.1-201ENST00000509592 876 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RNA5SP384-201ENST00000516615 116 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RNU6-570P-201ENST00000517051 105 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RNA5SP278-201ENST00000517055 102 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 RN7SKP283-201ENST00000517197 270 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC078899.1-201ENST00000521432 1185 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TRIM77BP-201ENST00000524985 1119 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 DEFB109D-201ENST00000529497 240 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 OR11H5P-201ENST00000554039 926 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 LARP7P2-201ENST00000575306 125 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC004241.2-201ENST00000614562 444 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC022467.1-201ENST00000614738 749 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 MIR6721-201ENST00000617181 87 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 AC130304.1-201ENST00000622942 2385 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 NCOA4P3-201ENST00000513203 1877 ntBASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SNIP1Q8TAD8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 CDY18P-201ENST00000438294 1609 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 DHX40P1-201ENST00000588725 1412 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RNU6-48P-201ENST00000384161 107 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RNU6-378P-201ENST00000384324 107 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RNU6-1140P-201ENST00000410517 106 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 USMG5P1-201ENST00000425964 177 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 MED13P1-201ENST00000428342 171 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AC007679.3-201ENST00000434035 414 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RPL21P133-201ENST00000443666 476 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 GAPDHP20-201ENST00000444107 1007 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 CYCSP24-201ENST00000445119 316 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RPL23AP8-201ENST00000479812 475 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RN7SL413P-201ENST00000482700 297 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AC108860.1-201ENST00000484521 383 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 CR383656.1-201ENST00000484916 377 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 HMGN1P16-201ENST00000508308 283 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 AC022296.2-201ENST00000512424 202 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 RNU5B-3P-201ENST00000516601 115 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.54□□□□□ -1.36
SNIP1Q8TAD8 IGKV3D-34-201ENST00000522638 302 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms