Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 Y_RNA.311-201ENST00000365068 96 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RNU6-1263P-201ENST00000384601 106 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RNU6-253P-201ENST00000384730 105 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 MIR217-201ENST00000384817 110 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RNU1-149P-201ENST00000390870 161 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 U3.35-201ENST00000408405 208 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 MIR548F1-201ENST00000408667 84 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SNORA77-201ENST00000408716 125 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 TPT1P2-201ENST00000413105 503 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 FNDC3CP-201ENST00000420795 1155 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 BX323845.1-201ENST00000432417 179 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SEPT7P5-201ENST00000434048 306 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RPS25P9-201ENST00000435591 252 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SUMO2P3-201ENST00000438311 288 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RPS29P9-201ENST00000440360 171 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC072039.1-201ENST00000477611 581 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC116337.2-201ENST00000477662 156 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC006499.4-201ENST00000510947 694 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RNU6-1225P-201ENST00000516336 65 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RNU6-941P-201ENST00000516346 108 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AF186190.1-201ENST00000517470 480 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC012339.2-201ENST00000523996 453 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC087883.1-201ENST00000551882 391 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC079075.1-201ENST00000559543 878 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC087477.6-201ENST00000559595 843 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 OR4G1P-201ENST00000588632 938 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC015871.2-201ENST00000603605 948 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC007684.1-201ENST00000609671 477 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC069234.5-201ENST00000611056 416 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 LINC00901.1-201ENST00000617252 152 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 U6.42-201ENST00000618440 107 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AL591926.1-201ENST00000620542 217 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 AC235565.1-201ENST00000456962 1325 ntBASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NANOGP1Q8N7R0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 RN7SKP224-201ENST00000364140 325 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 SNORA4.1-201ENST00000364263 144 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 Y_RNA.248-201ENST00000364501 109 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 RN7SKP275-201ENST00000364626 301 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 RNU5E-4P-201ENST00000364931 120 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 MIR525-201ENST00000384978 85 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 MIR195-201ENST00000385194 87 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 RNA5SP339-201ENST00000390987 122 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 VN1R12P-201ENST00000403778 876 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 OR8G2P-201ENST00000412796 908 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 RPL23AP4-201ENST00000427757 463 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AL139415.2-201ENST00000431968 163 ntBASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.42□□□□□ -1.7
NANOGP1Q8N7R0 AL390119.1-201ENST00000440329 312 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms