Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AP001542.2-201ENST00000593141 364 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 AC099676.1-201ENST00000608886 657 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 AC007497.1-201ENST00000610421 561 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 U6.42-201ENST00000618440 107 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 AL607023.1-201ENST00000620045 248 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-368P-201ENST00000620928 107 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 RNU6-538P-201ENST00000622329 107 ntBASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A3Q8N4M1 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 SEC63P2-201ENST00000503863 1939 ntBASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 AL022322.2-201ENST00000624072 20397 ntBASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A3Q8N4M1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC026523.2-201ENST00000625039 7739 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 ENSAP3-201ENST00000312710 333 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 IGKV7-3-201ENST00000357453 298 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RNA5SP223-201ENST00000365174 120 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 SNORA70.10-201ENST00000384515 134 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 MIR1193-201ENST00000408109 78 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RN7SKP27-201ENST00000410684 333 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RNU6-575P-201ENST00000411326 105 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC007435.1-201ENST00000421086 415 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AL592293.2-201ENST00000422292 996 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AL732292.1-201ENST00000426692 226 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 MRPS10P2-201ENST00000431226 381 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 USP9YP31-201ENST00000431405 881 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC093716.1-201ENST00000435923 377 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RBMX2P4-201ENST00000441256 376 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 SEPT7P3-201ENST00000455017 621 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 OR11I1P-201ENST00000486033 954 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC013356.1-201ENST00000489027 564 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 HMGB3P13-201ENST00000511263 607 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC098976.1-201ENST00000513014 541 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RFPL4AP3-201ENST00000515267 345 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 RNA5SP392-201ENST00000516905 112 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 FTH1P11-201ENST00000517577 551 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AL139174.1-201ENST00000531489 886 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AP001804.2-201ENST00000533932 910 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 LSM3P2-201ENST00000551246 273 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AL133241.1-201ENST00000556832 487 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC027104.1-201ENST00000563702 681 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC234778.2-201ENST00000566241 354 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AL121834.1-201ENST00000572284 509 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 ROCK1P1-201ENST00000573767 549 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 MIR1254-2-201ENST00000579553 63 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 U73023.1-201ENST00000603134 700 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AL592221.1-201ENST00000605266 382 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC069545.1-201ENST00000605671 358 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AP005137.2-201ENST00000609238 400 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC005962.2-201ENST00000611427 652 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC008443.7-201ENST00000622195 246 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC019226.1-201ENST00000625666 515 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 PCMTD1P7-201ENST00000634506 357 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 AC091046.3-201ENST00000631455 1574 ntBASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
SLC44A3Q8N4M1 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms