Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 RN7SL184P-201ENST00000488308 297 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC025164.1-201ENST00000496249 478 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 HIGD1AP14-201ENST00000507617 282 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC018797.3-201ENST00000513388 1241 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC009902.1-201ENST00000519351 183 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC011979.2-201ENST00000527568 352 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AP000763.2-201ENST00000540641 163 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 SETP2-201ENST00000553886 926 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 MIR5690-201ENST00000583739 73 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AL512605.2-201ENST00000592972 256 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC111186.1-201ENST00000604684 130 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC007938.3-201ENST00000604965 623 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AL592436.1-201ENST00000605135 558 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 MIR6085-201ENST00000618314 110 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC012213.2-201ENST00000562917 4597 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 AC011460.1-201ENST00000636268 1834 ntBASIC7.04□□□□□ -1.28
PRPF38BQ5VTL8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC007993.1-201ENST00000621298 2430 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 MIR137-201ENST00000385223 102 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 NMD3P2-201ENST00000421815 761 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AL590233.1-201ENST00000430017 456 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 UBE2V1P13-201ENST00000436983 439 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AL731563.1-201ENST00000442202 214 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RPL7P52-201ENST00000449200 742 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RPL23AP11-201ENST00000475260 469 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 UBA52P7-201ENST00000486088 380 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RN7SL346P-201ENST00000491561 294 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RNU6-1038P-201ENST00000516516 104 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RN7SKP295-201ENST00000517264 153 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 MYL12AP1-201ENST00000518490 515 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 LSM3P2-201ENST00000551246 273 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 MIR4790-201ENST00000577799 79 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC091768.1-201ENST00000609258 930 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC243654.2-201ENST00000612843 443 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AC244100.1-202ENST00000621554 382 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 ELL2P4-201ENST00000446870 1376 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 XPOTP1-201ENST00000443317 2398 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 AP003119.3-201ENST00000566747 4192 ntBASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.03□□□□□ -1.28
PRPF38BQ5VTL8 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
PRPF38BQ5VTL8 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
PRPF38BQ5VTL8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
PRPF38BQ5VTL8 MTCO1P7-201ENST00000419523 1542 ntBASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PRPF38BQ5VTL8 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms