Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 AL358232.1-201ENST00000448030 501 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 AC034236.1-201ENST00000469891 373 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 RPL7L1P8-201ENST00000469911 741 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.53□□□□□ -1.68
GABPAQ06546 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 AC026403.1-201ENST00000518938 295 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
GABPAQ06546 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 AC107918.3-201ENST00000533272 382 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.53□□□□□ -1.68
GABPAQ06546 GNRHR2P1-201ENST00000555315 631 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.53□□□□□ -1.68
GABPAQ06546 AL049844.2-201ENST00000604280 628 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 SUMO2P14-201ENST00000604488 293 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 AC135178.6-201ENST00000605314 398 ntBASIC4.53□□□□□ -1.68
GABPAQ06546 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.53□□□□□ -1.68
GABPAQ06546 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
GABPAQ06546 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.53□□□□□ -1.69
GABPAQ06546 AC106871.1-201ENST00000568324 3102 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 SNORA5A-201ENST00000384111 134 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 MIR320B1-201ENST00000390209 79 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
GABPAQ06546 RPL21P17-201ENST00000397467 475 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC019070.1-201ENST00000415008 1024 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC011742.1-201ENST00000431448 434 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 KCTD9P3-201ENST00000434597 1169 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 VN1R25P-201ENST00000443385 738 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.52□□□□□ -1.69
GABPAQ06546 RPL6P5-201ENST00000445678 828 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 AC073587.1-201ENST00000447093 876 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 VN1R40P-201ENST00000455196 941 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 MTND2P6-201ENST00000455337 1030 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC025768.1-201ENST00000510057 267 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC108471.1-201ENST00000513977 287 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.52□□□□□ -1.69
GABPAQ06546 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.52□□□□□ -1.69
GABPAQ06546 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.52□□□□□ -1.69
GABPAQ06546 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.52□□□□□ -1.69
GABPAQ06546 AC233266.2-201ENST00000567067 528 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.52□□□□□ -1.69
GABPAQ06546 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.52□□□□□ -1.69
GABPAQ06546 AC092474.3-201ENST00000603022 568 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 AC005972.3-201ENST00000606304 481 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 AC079684.1-201ENST00000621405 437 ntBASIC4.52□□□□□ -1.69
GABPAQ06546 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
GABPAQ06546 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.52□□□□□ -1.69
GABPAQ06546 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
GABPAQ06546 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GABPAQ06546 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.51□□□□□ -1.69
GABPAQ06546 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABPAQ06546 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABPAQ06546 AL512430.2-201ENST00000406786 339 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 RPS3AP25-201ENST00000411660 793 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 MTND2P15-201ENST00000418575 892 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC092647.1-201ENST00000420654 287 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 PTP4A1P3-201ENST00000433661 420 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.51□□□□□ -1.69
GABPAQ06546 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 AC017099.1-201ENST00000448261 1028 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 HMGB1P5-202ENST00000451497 985 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.51□□□□□ -1.69
GABPAQ06546 AC103833.1-201ENST00000517442 172 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.51□□□□□ -1.69
GABPAQ06546 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.51□□□□□ -1.69
GABPAQ06546 HAUS1P3-201ENST00000523909 662 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.51□□□□□ -1.69
GABPAQ06546 AC069240.1-201ENST00000548774 375 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC093014.1-201ENST00000548926 724 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.51□□□□□ -1.69
GABPAQ06546 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 AL049870.4-201ENST00000555741 486 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.51□□□□□ -1.69
GABPAQ06546 AC012603.1-201ENST00000606424 528 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AP000255.1-201ENST00000610276 676 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 MIR1264-201ENST00000616374 69 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms