Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR4286-201ENST00000580651 93 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 RN7SL622P-201ENST00000585292 275 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 BNIP3P27-201ENST00000599991 412 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 LLPHP1-201ENST00000603571 367 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AL392112.1-201ENST00000605115 829 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC018645.2-201ENST00000609151 472 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC105429.2-201ENST00000610567 517 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 C2orf27A-204ENST00000623058 969 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 AL049737.1-201ENST00000413920 1403 ntBASIC4.51□□□□□ -1.69
LIMK1P53667 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIMK1P53667 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LIMK1P53667 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LIMK1P53667 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LIMK1P53667 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK1P53667 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK1P53667 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 OR51B3P-201ENST00000412287 913 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC004448.2-201ENST00000422360 586 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC008065.1-201ENST00000428525 348 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 NPM1P34-201ENST00000428821 893 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK1P53667 RPS3AP54-201ENST00000435535 734 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK1P53667 HSFY3P-201ENST00000444242 1191 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 RPS4XP6-201ENST00000477670 797 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC025164.1-201ENST00000496249 478 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC110792.2-201ENST00000510278 224 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 VWA8P1-201ENST00000510889 176 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 RNU6-709P-201ENST00000517257 104 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC010306.1-201ENST00000523223 1117 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.5□□□□□ -1.69
LIMK1P53667 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK1P53667 AL352979.3-201ENST00000553515 247 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 MIR4789-201ENST00000577469 82 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC005255.1-201ENST00000593748 216 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC069304.3-201ENST00000603938 1084 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC023509.5-201ENST00000617434 807 ntBASIC4.5□□□□□ -1.69
LIMK1P53667 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.5□□□□□ -1.69
LIMK1P53667 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIMK1P53667 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK1P53667 MIR383-201ENST00000362257 73 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 RNU6-1339P-201ENST00000363574 91 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 Y_RNA.333-201ENST00000365274 102 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK1P53667 RPL22P22-201ENST00000395439 379 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
LIMK1P53667 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.49□□□□□ -1.69
LIMK1P53667 VN1R37P-201ENST00000419096 748 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 RPL23AP38-201ENST00000423801 469 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.49□□□□□ -1.69
LIMK1P53667 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.49□□□□□ -1.69
LIMK1P53667 AC011242.1-201ENST00000433596 1158 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC007389.2-201ENST00000434630 306 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.49□□□□□ -1.69
LIMK1P53667 PRSS3P4-201ENST00000453323 162 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 snoU13.24-201ENST00000458998 104 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 SCARNA10-201ENST00000459255 330 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC091564.1-201ENST00000464563 479 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC091959.2-201ENST00000477363 321 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK1P53667 SCARNA13-201ENST00000516672 275 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 RN7SKP283-201ENST00000517197 270 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK1P53667 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK1P53667 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.49□□□□□ -1.69
LIMK1P53667 AC010735.1-201ENST00000567305 1026 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC126365.2-201ENST00000580630 379 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 AC017104.5-201ENST00000637647 639 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK1P53667 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK1P53667 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LIMK1P53667 AC083899.2-201ENST00000423285 1376 ntBASIC4.49□□□□□ -1.69
LIMK1P53667 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.49□□□□□ -1.69
LIMK1P53667 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK1P53667 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIMK1P53667 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LIMK1P53667 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms