Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 PHKBP1-201ENST00000450951 1951 ntBASIC4.27□□□□□ -1.73
ACLYP53396 ASNSP1-201ENST00000518311 1939 ntBASIC4.27□□□□□ -1.73
ACLYP53396 AL451142.2-201ENST00000429076 2090 ntBASIC4.26□□□□□ -1.73
ACLYP53396 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ACLYP53396 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.26□□□□□ -1.73
ACLYP53396 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ACLYP53396 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 MIR448-201ENST00000362131 111 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 MIR199A2-201ENST00000385289 110 ntBASIC4.26□□□□□ -1.73
ACLYP53396 Z92545.1-201ENST00000411782 234 ntBASIC4.26□□□□□ -1.73
ACLYP53396 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AL355994.1-201ENST00000424379 260 ntBASIC4.26□□□□□ -1.73
ACLYP53396 MTCO3P21-201ENST00000430791 643 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.26□□□□□ -1.73
ACLYP53396 RPS3AP46-201ENST00000448352 682 ntBASIC4.26□□□□□ -1.73
ACLYP53396 UBDP1-202ENST00000457888 382 ntBASIC4.26□□□□□ -1.73
ACLYP53396 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.26□□□□□ -1.73
ACLYP53396 UBA52P3-201ENST00000491303 382 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AC005726.1-201ENST00000494679 427 ntBASIC4.26□□□□□ -1.73
ACLYP53396 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.26□□□□□ -1.73
ACLYP53396 AC113430.1-201ENST00000506872 718 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.26□□□□□ -1.73
ACLYP53396 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.26□□□□□ -1.73
ACLYP53396 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.26□□□□□ -1.73
ACLYP53396 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.26□□□□□ -1.73
ACLYP53396 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.26□□□□□ -1.73
ACLYP53396 EIF1AXP2-201ENST00000555940 413 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AC011471.1-201ENST00000585766 187 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.26□□□□□ -1.73
ACLYP53396 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.26□□□□□ -1.73
ACLYP53396 RNU1-30P-201ENST00000606575 163 ntBASIC4.26□□□□□ -1.73
ACLYP53396 AC131238.1-201ENST00000617135 328 ntBASIC4.26□□□□□ -1.73
ACLYP53396 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.26□□□□□ -1.73
ACLYP53396 AC083899.2-201ENST00000423285 1376 ntBASIC4.26□□□□□ -1.73
ACLYP53396 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ACLYP53396 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ACLYP53396 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ACLYP53396 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.25□□□□□ -1.73
ACLYP53396 RNU4-23P-201ENST00000362839 140 ntBASIC4.25□□□□□ -1.73
ACLYP53396 RNU6-304P-201ENST00000364855 107 ntBASIC4.25□□□□□ -1.73
ACLYP53396 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ACLYP53396 NDUFB4P4-201ENST00000404822 243 ntBASIC4.25□□□□□ -1.73
ACLYP53396 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.25□□□□□ -1.73
ACLYP53396 RNU6-603P-201ENST00000411403 107 ntBASIC4.25□□□□□ -1.73
ACLYP53396 ATP5A1P2-201ENST00000412323 255 ntBASIC4.25□□□□□ -1.73
ACLYP53396 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 RPS7P15-201ENST00000415804 584 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC073136.2-201ENST00000417282 849 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC048351.1-201ENST00000420064 602 ntBASIC4.25□□□□□ -1.73
ACLYP53396 DPY19L1P2-201ENST00000426647 915 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC092013.1-201ENST00000438795 332 ntBASIC4.25□□□□□ -1.73
ACLYP53396 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.25□□□□□ -1.73
ACLYP53396 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 RPL21P23-201ENST00000446654 460 ntBASIC4.25□□□□□ -1.73
ACLYP53396 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 RNU6-347P-201ENST00000516658 105 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 AC068020.1-201ENST00000594215 661 ntBASIC4.25□□□□□ -1.73
ACLYP53396 OR2BH1P-201ENST00000608850 864 ntBASIC4.25□□□□□ -1.73
ACLYP53396 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.25□□□□□ -1.73
ACLYP53396 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC116447.1-201ENST00000613153 453 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC243312.2-201ENST00000623340 601 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC074029.4-201ENST00000624796 1859 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC019080.5-201ENST00000624891 757 ntBASIC4.25□□□□□ -1.73
ACLYP53396 AC244258.1-201ENST00000637553 1071 ntBASIC4.25□□□□□ -1.73
ACLYP53396 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
ACLYP53396 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ACLYP53396 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
ACLYP53396 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ACLYP53396 KPNA2P2-201ENST00000419546 1489 ntBASIC4.24□□□□□ -1.73
ACLYP53396 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ACLYP53396 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
ACLYP53396 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ACLYP53396 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ACLYP53396 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.24□□□□□ -1.73
ACLYP53396 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ACLYP53396 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ACLYP53396 RPL7P60-201ENST00000397636 735 ntBASIC4.24□□□□□ -1.73
ACLYP53396 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms