Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MIR6875-201ENST00000617506 72 ntBASIC3.83□□□□□ -1.8
EFNA3P52797 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.83□□□□□ -1.8
EFNA3P52797 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.83□□□□□ -1.8
EFNA3P52797 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EFNA3P52797 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
EFNA3P52797 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.82□□□□□ -1.8
EFNA3P52797 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.82□□□□□ -1.8
EFNA3P52797 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.82□□□□□ -1.8
EFNA3P52797 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.82□□□□□ -1.8
EFNA3P52797 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
EFNA3P52797 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 RNU6-317P-201ENST00000384031 107 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 RNU4-31P-201ENST00000384211 141 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 RNU6-796P-201ENST00000391086 107 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.82□□□□□ -1.8
EFNA3P52797 AP000357.1-201ENST00000409926 1165 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.82□□□□□ -1.8
EFNA3P52797 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 RAC1P3-201ENST00000416129 580 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 AL121882.1-201ENST00000422893 417 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 NPM1P24-201ENST00000428039 894 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 AC074367.1-201ENST00000438685 1125 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC092013.1-201ENST00000438795 332 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 RPL23AP89-201ENST00000439324 255 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 RNFT1P2-201ENST00000443064 757 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC097499.1-201ENST00000444277 208 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.82□□□□□ -1.8
EFNA3P52797 PPBPP1-201ENST00000510807 373 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 HMGB1P23-201ENST00000518743 568 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 DEFB109D-201ENST00000529497 240 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.82□□□□□ -1.8
EFNA3P52797 MTND6P33-201ENST00000571794 183 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 RPL23AP87-202ENST00000573039 466 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC110743.1-201ENST00000584870 478 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 AC068790.5-201ENST00000602741 355 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.82□□□□□ -1.8
EFNA3P52797 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.82□□□□□ -1.8
EFNA3P52797 AL136370.1-201ENST00000608166 691 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 MIR6868-201ENST00000611215 58 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AL669942.2-201ENST00000620352 697 ntBASIC3.82□□□□□ -1.8
EFNA3P52797 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
EFNA3P52797 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
EFNA3P52797 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
EFNA3P52797 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EFNA3P52797 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
EFNA3P52797 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.81□□□□□ -1.8
EFNA3P52797 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.81□□□□□ -1.8
EFNA3P52797 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 RNU6-1279P-201ENST00000383917 103 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 MIR3074-201ENST00000384885 81 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 ATF1P1-201ENST00000406040 927 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 PTGES3P2-201ENST00000407942 482 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.81□□□□□ -1.8
EFNA3P52797 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.81□□□□□ -1.8
EFNA3P52797 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.81□□□□□ -1.8
EFNA3P52797 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.81□□□□□ -1.8
EFNA3P52797 AC108032.1-201ENST00000416706 207 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 SEC63P1-201ENST00000425785 1258 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.81□□□□□ -1.8
EFNA3P52797 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.81□□□□□ -1.8
EFNA3P52797 TPTE2P6-202ENST00000445572 1007 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.81□□□□□ -1.8
EFNA3P52797 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EFNA3P52797 AC007537.2-201ENST00000472093 511 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 S100A11P1-201ENST00000477525 312 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 NPM1P17-201ENST00000479221 602 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 AC104687.1-201ENST00000485829 412 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 VN1R105P-201ENST00000486595 910 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 RPS4XP15-201ENST00000489210 795 ntBASIC3.81□□□□□ -1.8
EFNA3P52797 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
EFNA3P52797 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
EFNA3P52797 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms