Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 MTCO1P24-201ENST00000515438 1558 ntBASIC6.34□□□□□ -1.39
SMARCA2P51531 AP000542.2-201ENST00000623199 6179 ntBASIC6.34□□□□□ -1.4
SMARCA2P51531 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMARCA2P51531 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMARCA2P51531 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.33□□□□□ -1.4
SMARCA2P51531 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.33□□□□□ -1.4
SMARCA2P51531 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC6.33□□□□□ -1.4
SMARCA2P51531 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.33□□□□□ -1.4
SMARCA2P51531 HMGB3P13-201ENST00000511263 607 ntBASIC6.33□□□□□ -1.4
SMARCA2P51531 AC023141.12-201ENST00000512399 199 ntBASIC6.33□□□□□ -1.4
SMARCA2P51531 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.33□□□□□ -1.4
SMARCA2P51531 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.33□□□□□ -1.4
SMARCA2P51531 AC027281.1-201ENST00000574178 758 ntBASIC6.33□□□□□ -1.4
SMARCA2P51531 OR7M1P-201ENST00000608946 533 ntBASIC6.33□□□□□ -1.4
SMARCA2P51531 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.33□□□□□ -1.4
SMARCA2P51531 AL732618.1-201ENST00000623251 301 ntBASIC6.33□□□□□ -1.4
SMARCA2P51531 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMARCA2P51531 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SMARCA2P51531 CPD-202ENST00000543464 4007 ntTSL 2 BASIC6.32□□□□□ -1.4
SMARCA2P51531 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.32□□□□□ -1.4
SMARCA2P51531 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.32□□□□□ -1.4
SMARCA2P51531 BX323014.1-201ENST00000412876 237 ntBASIC6.32□□□□□ -1.4
SMARCA2P51531 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.32□□□□□ -1.4
SMARCA2P51531 AC022795.1-201ENST00000473808 480 ntBASIC6.32□□□□□ -1.4
SMARCA2P51531 UBA52P3-201ENST00000491303 382 ntBASIC6.32□□□□□ -1.4
SMARCA2P51531 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMARCA2P51531 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.32□□□□□ -1.4
SMARCA2P51531 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.32□□□□□ -1.4
SMARCA2P51531 AL162274.2-201ENST00000614406 332 ntBASIC6.32□□□□□ -1.4
SMARCA2P51531 AC026422.1-201ENST00000623961 452 ntBASIC6.32□□□□□ -1.4
SMARCA2P51531 OR5AC4P-202ENST00000642086 985 ntBASIC6.32□□□□□ -1.4
SMARCA2P51531 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC6.32□□□□□ -1.4
SMARCA2P51531 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMARCA2P51531 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMARCA2P51531 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMARCA2P51531 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMARCA2P51531 RNA5SP306-201ENST00000411087 107 ntBASIC6.31□□□□□ -1.4
SMARCA2P51531 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.31□□□□□ -1.4
SMARCA2P51531 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.31□□□□□ -1.4
SMARCA2P51531 RNU6-579P-201ENST00000516879 102 ntBASIC6.31□□□□□ -1.4
SMARCA2P51531 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.31□□□□□ -1.4
SMARCA2P51531 AL163642.2-201ENST00000604722 1019 ntBASIC6.31□□□□□ -1.4
SMARCA2P51531 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.31□□□□□ -1.4
SMARCA2P51531 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC6.31□□□□□ -1.4
SMARCA2P51531 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.31□□□□□ -1.4
SMARCA2P51531 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMARCA2P51531 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SMARCA2P51531 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SMARCA2P51531 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC6.31□□□□□ -1.4
SMARCA2P51531 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.31□□□□□ -1.4
SMARCA2P51531 AC109458.1-201ENST00000508858 316 ntBASIC6.31□□□□□ -1.4
SMARCA2P51531 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.31□□□□□ -1.4
SMARCA2P51531 AC012603.1-201ENST00000606424 528 ntBASIC6.31□□□□□ -1.4
SMARCA2P51531 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC6.31□□□□□ -1.4
SMARCA2P51531 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMARCA2P51531 AC024341.1-201ENST00000526444 1552 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.3□□□□□ -1.4
SMARCA2P51531 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SMARCA2P51531 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.3□□□□□ -1.4
SMARCA2P51531 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC6.3□□□□□ -1.4
SMARCA2P51531 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMARCA2P51531 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMARCA2P51531 RNU1-108P-201ENST00000362556 161 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 AC069285.2-201ENST00000440210 275 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 HMGB1P21-201ENST00000502313 581 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 AC027309.2-201ENST00000520566 192 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 CR383656.14-201ENST00000551951 406 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 AC128687.2-201ENST00000609657 566 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 SMG1P4-204ENST00000523028 4131 ntBASIC6.3□□□□□ -1.4
SMARCA2P51531 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SMARCA2P51531 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SMARCA2P51531 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.29□□□□□ -1.4
SMARCA2P51531 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SMARCA2P51531 MTCO1P7-201ENST00000419523 1542 ntBASIC6.29□□□□□ -1.4
SMARCA2P51531 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.29□□□□□ -1.4
SMARCA2P51531 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.29□□□□□ -1.4
SMARCA2P51531 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.29□□□□□ -1.4
SMARCA2P51531 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.29□□□□□ -1.4
SMARCA2P51531 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.29□□□□□ -1.4
SMARCA2P51531 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.29□□□□□ -1.4
SMARCA2P51531 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC6.29□□□□□ -1.4
SMARCA2P51531 HIGD1AP3-201ENST00000515857 278 ntBASIC6.29□□□□□ -1.4
SMARCA2P51531 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.29□□□□□ -1.4
SMARCA2P51531 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMARCA2P51531 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.29□□□□□ -1.4
SMARCA2P51531 AC006539.2-201ENST00000601729 572 ntBASIC6.29□□□□□ -1.4
SMARCA2P51531 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.29□□□□□ -1.4
SMARCA2P51531 AC084036.1-201ENST00000609190 508 ntBASIC6.29□□□□□ -1.4
SMARCA2P51531 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SMARCA2P51531 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SMARCA2P51531 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SMARCA2P51531 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.29□□□□□ -1.4
SMARCA2P51531 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC6.29□□□□□ -1.4
SMARCA2P51531 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms