Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.62□□□□□ -1.67
HADHAP40939 AC119751.6-201ENST00000416712 186 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.62□□□□□ -1.67
HADHAP40939 NPM1P34-201ENST00000428821 893 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.62□□□□□ -1.67
HADHAP40939 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.62□□□□□ -1.67
HADHAP40939 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.62□□□□□ -1.67
HADHAP40939 AC073264.2-201ENST00000448886 166 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AL645939.1-201ENST00000453429 797 ntBASIC4.62□□□□□ -1.67
HADHAP40939 ISCUP1-201ENST00000454451 448 ntBASIC4.62□□□□□ -1.67
HADHAP40939 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.62□□□□□ -1.67
HADHAP40939 RPS29P33-201ENST00000456717 146 ntBASIC4.62□□□□□ -1.67
HADHAP40939 SCARNA10-201ENST00000459255 330 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AP000893.1-201ENST00000474462 794 ntBASIC4.62□□□□□ -1.67
HADHAP40939 S100A11P1-201ENST00000477525 312 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AC096571.1-202ENST00000506634 735 ntBASIC4.62□□□□□ -1.67
HADHAP40939 OR51K1P-201ENST00000510214 950 ntBASIC4.62□□□□□ -1.67
HADHAP40939 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.62□□□□□ -1.67
HADHAP40939 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.62□□□□□ -1.67
HADHAP40939 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.62□□□□□ -1.67
HADHAP40939 AP006289.1-201ENST00000538089 277 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HADHAP40939 ELOCP28-201ENST00000590044 317 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AC024060.1-201ENST00000607052 494 ntBASIC4.62□□□□□ -1.67
HADHAP40939 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HADHAP40939 AC016597.2-201ENST00000613256 341 ntBASIC4.62□□□□□ -1.67
HADHAP40939 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.62□□□□□ -1.67
HADHAP40939 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HADHAP40939 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HADHAP40939 DCAF13P3-201ENST00000561147 1334 ntBASIC4.62□□□□□ -1.67
HADHAP40939 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.62□□□□□ -1.67
HADHAP40939 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HADHAP40939 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.62□□□□□ -1.67
HADHAP40939 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.62□□□□□ -1.67
HADHAP40939 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.61□□□□□ -1.67
HADHAP40939 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HADHAP40939 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.61□□□□□ -1.67
HADHAP40939 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 AC018529.3-201ENST00000624212 2254 ntBASIC4.61□□□□□ -1.67
HADHAP40939 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HADHAP40939 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HADHAP40939 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 FCF1P5-201ENST00000406490 482 ntBASIC4.61□□□□□ -1.67
HADHAP40939 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.61□□□□□ -1.67
HADHAP40939 NUP35P2-201ENST00000416748 943 ntBASIC4.61□□□□□ -1.67
HADHAP40939 UBTFL3-201ENST00000418934 1024 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC062016.2-201ENST00000420950 676 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC233981.1-201ENST00000423224 461 ntBASIC4.61□□□□□ -1.67
HADHAP40939 GTF2IP2-201ENST00000424290 697 ntBASIC4.61□□□□□ -1.67
HADHAP40939 UBE2V1P1-201ENST00000430836 445 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AL513175.1-201ENST00000431492 780 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.61□□□□□ -1.67
HADHAP40939 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.61□□□□□ -1.67
HADHAP40939 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.61□□□□□ -1.67
HADHAP40939 RPS20P21-201ENST00000466859 343 ntBASIC4.61□□□□□ -1.67
HADHAP40939 UBTFL6-201ENST00000477929 1024 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.61□□□□□ -1.67
HADHAP40939 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.61□□□□□ -1.67
HADHAP40939 RNA5SP497-201ENST00000516081 97 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC021451.1-201ENST00000523498 1129 ntBASIC4.61□□□□□ -1.67
HADHAP40939 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 MTCO3P15-201ENST00000526563 574 ntBASIC4.61□□□□□ -1.67
HADHAP40939 OR4C2P-201ENST00000530855 1064 ntBASIC4.61□□□□□ -1.67
HADHAP40939 OR8K4P-201ENST00000534608 872 ntBASIC4.61□□□□□ -1.67
HADHAP40939 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 AC090330.1-201ENST00000588646 764 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC096947.1-201ENST00000603233 470 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AL133338.2-201ENST00000604292 736 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC019193.2-201ENST00000610012 634 ntBASIC4.61□□□□□ -1.67
HADHAP40939 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC124312.6-202ENST00000623624 418 ntBASIC4.61□□□□□ -1.67
HADHAP40939 OR1S1-201ENST00000624470 978 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC055839.1-201ENST00000634467 498 ntBASIC4.61□□□□□ -1.67
HADHAP40939 AC068620.4-201ENST00000636730 1182 ntBASIC4.61□□□□□ -1.67
HADHAP40939 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 AC025031.4-201ENST00000621248 3271 ntBASIC4.61□□□□□ -1.67
HADHAP40939 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.61□□□□□ -1.67
HADHAP40939 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HADHAP40939 AL391684.1-202ENST00000641293 1636 ntBASIC4.61□□□□□ -1.67
HADHAP40939 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
HADHAP40939 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 AC105074.1-201ENST00000623380 3095 ntBASIC4.6□□□□□ -1.67
HADHAP40939 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HADHAP40939 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.6□□□□□ -1.67
HADHAP40939 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HADHAP40939 Y_RNA.578-201ENST00000390903 88 ntBASIC4.6□□□□□ -1.67
HADHAP40939 FABP12P1-201ENST00000401911 322 ntBASIC4.6□□□□□ -1.67
HADHAP40939 SFR1P1-201ENST00000403720 688 ntBASIC4.6□□□□□ -1.67
HADHAP40939 AL121834.1-202ENST00000404494 277 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms