Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AL353726.1-201ENST00000614041 1000 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AC023158.2-201ENST00000614876 543 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 MIR4278-201ENST00000636094 69 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 OR2L1P-202ENST00000641567 1023 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC000123.3-201ENST00000624029 4975 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 Z95327.2-201ENST00000414579 1873 ntBASIC5.43□□□□□ -1.54
SMARCA1P28370 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SMARCA1P28370 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SMARCA1P28370 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.42□□□□□ -1.54
SMARCA1P28370 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMARCA1P28370 LINC01109-201ENST00000603837 3081 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AC010928.1-201ENST00000592477 1447 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMARCA1P28370 AL590240.1-201ENST00000334118 313 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 OR52E6-202ENST00000379946 954 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMARCA1P28370 SDHCP2-201ENST00000398565 501 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMARCA1P28370 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 MORF4L1P6-201ENST00000418771 268 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 OR2AH1P-201ENST00000425717 928 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 MTCO1P54-201ENST00000430139 712 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 RPL21P110-201ENST00000433345 446 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.42□□□□□ -1.54
SMARCA1P28370 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 Z80107.2-201ENST00000445127 392 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 YWHAQP9-201ENST00000445891 512 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 COX6CP18-201ENST00000448769 222 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AC073264.2-201ENST00000448886 166 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AC104306.1-201ENST00000449702 371 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 RPL21P134-201ENST00000453468 483 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 RPL37P3-201ENST00000456825 293 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AC007686.1-201ENST00000488511 463 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SMARCA1P28370 RPF2P2-201ENST00000504693 896 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 IGBP1P5-201ENST00000507524 1000 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 COX6B1P6-201ENST00000522347 255 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 OR5M2P-201ENST00000529003 936 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AP006289.1-201ENST00000538089 277 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 ELOCP32-201ENST00000548625 324 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 HIGD1AP17-201ENST00000554576 276 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.42□□□□□ -1.54
SMARCA1P28370 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AC069545.1-201ENST00000605671 358 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 CR392039.4-201ENST00000624968 501 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AL022393.1-201ENST00000625142 1677 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 AC000374.1-201ENST00000434698 1745 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SMARCA1P28370 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 AL672167.1-204ENST00000641875 3017 ntBASIC5.42□□□□□ -1.54
SMARCA1P28370 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SMARCA1P28370 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SMARCA1P28370 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SMARCA1P28370 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.42□□□□□ -1.54
SMARCA1P28370 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMARCA1P28370 AL118496.1-201ENST00000440201 1812 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMARCA1P28370 AC135352.1-201ENST00000506173 1418 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 DHX40P1-201ENST00000588725 1412 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMARCA1P28370 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SMARCA1P28370 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
SMARCA1P28370 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
SMARCA1P28370 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.41□□□□□ -1.54
SMARCA1P28370 ZNF137P-201ENST00000456718 1920 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 OR4K15-201ENST00000305051 1216 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMARCA1P28370 SNORD113.2-201ENST00000364166 89 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 RNU5A-2P-201ENST00000384337 116 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SMARCA1P28370 RNA5SP80-201ENST00000410475 111 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 NRBF2P2-201ENST00000413087 861 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.41□□□□□ -1.54
SMARCA1P28370 AL590609.2-201ENST00000421430 368 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 MTND4P20-201ENST00000424125 869 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 FABP7P2-201ENST00000429946 379 ntBASIC5.41□□□□□ -1.54
SMARCA1P28370 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.41□□□□□ -1.54
SMARCA1P28370 MTND6P18-201ENST00000439477 513 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms