Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.81□□□□□ -1.64
MMP3P08254 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP3P08254 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP3P08254 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP3P08254 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP3P08254 AC022916.3-201ENST00000592961 742 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC107952.2-201ENST00000606048 486 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC099676.1-201ENST00000608886 657 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP3P08254 AC092106.3-201ENST00000611308 722 ntBASIC4.81□□□□□ -1.64
MMP3P08254 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.81□□□□□ -1.64
MMP3P08254 AC231759.1-201ENST00000616455 597 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC010975.3-201ENST00000618727 978 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AL121895.2-201ENST00000619558 447 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AC007546.2-201ENST00000623996 360 ntBASIC4.81□□□□□ -1.64
MMP3P08254 U6.107-201ENST00000637108 79 ntBASIC4.81□□□□□ -1.64
MMP3P08254 BX649567.1-201ENST00000642071 1134 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AL731532.2-201ENST00000623542 1953 ntBASIC4.81□□□□□ -1.64
MMP3P08254 AL133243.3-201ENST00000617415 3004 ntBASIC4.81□□□□□ -1.64
MMP3P08254 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MMP3P08254 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
MMP3P08254 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.81□□□□□ -1.64
MMP3P08254 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
MMP3P08254 AL133268.1-201ENST00000405676 1401 ntBASIC4.8□□□□□ -1.64
MMP3P08254 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MMP3P08254 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
MMP3P08254 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP3P08254 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 RLIMP2-201ENST00000427891 1563 ntBASIC4.8□□□□□ -1.64
MMP3P08254 METTL21EP-201ENST00000298105 713 ntBASIC4.8□□□□□ -1.64
MMP3P08254 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 ENSAP3-201ENST00000312710 333 ntBASIC4.8□□□□□ -1.64
MMP3P08254 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MMP3P08254 RN7SKP224-201ENST00000364140 325 ntBASIC4.8□□□□□ -1.64
MMP3P08254 RNU6-636P-201ENST00000384598 107 ntBASIC4.8□□□□□ -1.64
MMP3P08254 RPS7P9-201ENST00000414704 586 ntBASIC4.8□□□□□ -1.64
MMP3P08254 RPL22P18-201ENST00000417197 377 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 MOB1AP1-201ENST00000430903 535 ntBASIC4.8□□□□□ -1.64
MMP3P08254 MTCO2P20-201ENST00000437339 673 ntBASIC4.8□□□□□ -1.64
MMP3P08254 MTCYBP31-201ENST00000438855 1122 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC005002.1-201ENST00000447458 540 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AL050341.1-201ENST00000447743 313 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 AC107015.1-201ENST00000466902 747 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC091951.3-201ENST00000504093 246 ntBASIC4.8□□□□□ -1.64
MMP3P08254 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 RNA5SP73-201ENST00000516744 108 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 UBTFL10-201ENST00000528532 562 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC105233.3-201ENST00000531125 744 ntBASIC4.8□□□□□ -1.64
MMP3P08254 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP3P08254 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.8□□□□□ -1.64
MMP3P08254 AGGF1P6-201ENST00000569213 976 ntBASIC4.8□□□□□ -1.64
MMP3P08254 VN1R78P-201ENST00000597393 564 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.8□□□□□ -1.64
MMP3P08254 AC124856.1-201ENST00000600819 896 ntBASIC4.8□□□□□ -1.64
MMP3P08254 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC010201.1-201ENST00000605051 540 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AL392112.1-201ENST00000605115 829 ntBASIC4.8□□□□□ -1.64
MMP3P08254 Z98200.1-201ENST00000607298 470 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC009237.15-201ENST00000610252 501 ntBASIC4.8□□□□□ -1.64
MMP3P08254 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 MIR8069-1-201ENST00000616627 86 ntBASIC4.8□□□□□ -1.64
MMP3P08254 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 AC234782.5-201ENST00000617723 324 ntBASIC4.8□□□□□ -1.64
MMP3P08254 MIR8069-2-201ENST00000621412 86 ntBASIC4.8□□□□□ -1.64
MMP3P08254 AC007342.8-201ENST00000623278 678 ntBASIC4.8□□□□□ -1.64
MMP3P08254 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MMP3P08254 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MMP3P08254 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
MMP3P08254 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
MMP3P08254 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
MMP3P08254 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 RNU6-236P-201ENST00000363886 106 ntBASIC4.79□□□□□ -1.64
MMP3P08254 RNA5SP130-201ENST00000364431 114 ntBASIC4.79□□□□□ -1.64
MMP3P08254 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
MMP3P08254 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms