Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX3O60493 RPAP2P1-201ENST00000603626 1168 ntBASIC4.13□□□□□ -1.75
SNX3O60493 AL354984.3-201ENST00000604803 325 ntBASIC4.13□□□□□ -1.75
SNX3O60493 AP000255.1-201ENST00000610276 676 ntBASIC4.13□□□□□ -1.75
SNX3O60493 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX3O60493 AC131238.1-201ENST00000617135 328 ntBASIC4.13□□□□□ -1.75
SNX3O60493 VN1R7P-201ENST00000619242 903 ntBASIC4.13□□□□□ -1.75
SNX3O60493 AP005264.7-201ENST00000625003 745 ntBASIC4.13□□□□□ -1.75
SNX3O60493 OR4G3P-201ENST00000633500 913 ntBASIC4.13□□□□□ -1.75
SNX3O60493 AC244205.2-202ENST00000635781 342 ntBASIC4.13□□□□□ -1.75
SNX3O60493 AC008013.2-202ENST00000637965 364 ntBASIC4.13□□□□□ -1.75
SNX3O60493 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX3O60493 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX3O60493 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX3O60493 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX3O60493 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX3O60493 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX3O60493 LINC00561-201ENST00000565815 2738 ntBASIC4.13□□□□□ -1.75
SNX3O60493 MTND4P10-201ENST00000446199 1363 ntBASIC4.13□□□□□ -1.75
SNX3O60493 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SNX3O60493 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX3O60493 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX3O60493 AL590240.1-201ENST00000334118 313 ntBASIC4.12□□□□□ -1.75
SNX3O60493 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.12□□□□□ -1.75
SNX3O60493 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.12□□□□□ -1.75
SNX3O60493 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX3O60493 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX3O60493 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX3O60493 PTGES3P1-201ENST00000439531 483 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC004854.1-201ENST00000440356 349 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AL645638.1-201ENST00000440519 361 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC004865.1-201ENST00000442276 1003 ntBASIC4.12□□□□□ -1.75
SNX3O60493 VN1R25P-201ENST00000443385 738 ntBASIC4.12□□□□□ -1.75
SNX3O60493 VN1R40P-201ENST00000455196 941 ntBASIC4.12□□□□□ -1.75
SNX3O60493 NAP1L1P3-201ENST00000462291 880 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC010683.1-201ENST00000473673 378 ntBASIC4.12□□□□□ -1.75
SNX3O60493 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX3O60493 AC006499.3-201ENST00000506077 748 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC008885.2-201ENST00000509506 930 ntBASIC4.12□□□□□ -1.75
SNX3O60493 ATP5LP3-201ENST00000514223 304 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AP001207.2-201ENST00000519490 539 ntBASIC4.12□□□□□ -1.75
SNX3O60493 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SNX3O60493 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 OR4A2P-201ENST00000527276 913 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AP000827.1-201ENST00000527814 258 ntBASIC4.12□□□□□ -1.75
SNX3O60493 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX3O60493 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.12□□□□□ -1.75
SNX3O60493 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.12□□□□□ -1.75
SNX3O60493 GNRHR2P1-201ENST00000555315 631 ntBASIC4.12□□□□□ -1.75
SNX3O60493 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 BGLT3-201ENST00000564523 994 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.12□□□□□ -1.75
SNX3O60493 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.12□□□□□ -1.75
SNX3O60493 AC098935.2-201ENST00000604222 466 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC104985.3-201ENST00000623479 597 ntBASIC4.12□□□□□ -1.75
SNX3O60493 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX3O60493 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX3O60493 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX3O60493 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SNX3O60493 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
SNX3O60493 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 AC138393.1-206ENST00000540997 1886 ntBASIC4.11□□□□□ -1.75
SNX3O60493 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 IPO8P1-201ENST00000455509 3109 ntBASIC4.11□□□□□ -1.75
SNX3O60493 MAPK10-263ENST00000641052 4307 ntBASIC4.11□□□□□ -1.75
SNX3O60493 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX3O60493 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX3O60493 Z98941.1-201ENST00000407764 100 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX3O60493 PGBD4P8-201ENST00000412993 562 ntBASIC4.11□□□□□ -1.75
SNX3O60493 PRELID3BP11-201ENST00000414230 479 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 AC027644.1-201ENST00000419595 298 ntBASIC4.11□□□□□ -1.75
SNX3O60493 RPL37P1-201ENST00000432310 284 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 APOOP2-201ENST00000461561 539 ntBASIC4.11□□□□□ -1.75
SNX3O60493 RPL6P9-201ENST00000466502 859 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX3O60493 AC011037.1-201ENST00000483964 558 ntBASIC4.11□□□□□ -1.75
SNX3O60493 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX3O60493 UBA52P3-201ENST00000491303 382 ntBASIC4.11□□□□□ -1.75
SNX3O60493 UBE2V1P12-201ENST00000503954 474 ntBASIC4.11□□□□□ -1.75
SNX3O60493 HIGD1AP14-201ENST00000507617 282 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.11□□□□□ -1.75
SNX3O60493 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.11□□□□□ -1.75
SNX3O60493 MIR3691-201ENST00000578066 90 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms