Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.53□□□□□ -1.84
SGCEO43556 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.53□□□□□ -1.84
SGCEO43556 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 AC022968.1-201ENST00000567372 442 ntBASIC3.53□□□□□ -1.84
SGCEO43556 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.53□□□□□ -1.84
SGCEO43556 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.53□□□□□ -1.84
SGCEO43556 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.53□□□□□ -1.84
SGCEO43556 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AP003117.2-201ENST00000606010 545 ntBASIC3.53□□□□□ -1.84
SGCEO43556 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.53□□□□□ -1.84
SGCEO43556 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 AL591424.2-201ENST00000617023 128 ntBASIC3.53□□□□□ -1.84
SGCEO43556 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 AC020763.5-201ENST00000623298 430 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.53□□□□□ -1.84
SGCEO43556 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SGCEO43556 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.53□□□□□ -1.84
SGCEO43556 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SGCEO43556 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 DCAF13P1-201ENST00000495256 1330 ntBASIC3.52□□□□□ -1.85
SGCEO43556 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 TPT1P2-201ENST00000413105 503 ntBASIC3.52□□□□□ -1.85
SGCEO43556 PRELID3BP11-201ENST00000414230 479 ntBASIC3.52□□□□□ -1.85
SGCEO43556 MTND2P15-201ENST00000418575 892 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.52□□□□□ -1.85
SGCEO43556 MTCO1P52-201ENST00000433928 531 ntBASIC3.52□□□□□ -1.85
SGCEO43556 ELOCP11-201ENST00000436690 332 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.52□□□□□ -1.85
SGCEO43556 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.52□□□□□ -1.85
SGCEO43556 AC245517.2-201ENST00000442890 346 ntBASIC3.52□□□□□ -1.85
SGCEO43556 ELOCP16-201ENST00000444494 332 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AP000873.1-201ENST00000463987 400 ntBASIC3.52□□□□□ -1.85
SGCEO43556 RN7SL330P-201ENST00000469709 307 ntBASIC3.52□□□□□ -1.85
SGCEO43556 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.52□□□□□ -1.85
SGCEO43556 RN7SL860P-201ENST00000473738 223 ntBASIC3.52□□□□□ -1.85
SGCEO43556 RPL21P103-201ENST00000479921 488 ntBASIC3.52□□□□□ -1.85
SGCEO43556 TRAV31-201ENST00000502780 342 ntBASIC3.52□□□□□ -1.85
SGCEO43556 HPRT1P1-201ENST00000509498 657 ntBASIC3.52□□□□□ -1.85
SGCEO43556 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.52□□□□□ -1.85
SGCEO43556 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.52□□□□□ -1.85
SGCEO43556 OR4V1P-201ENST00000525394 1140 ntBASIC3.52□□□□□ -1.85
SGCEO43556 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 AC092868.3-201ENST00000560515 784 ntBASIC3.52□□□□□ -1.85
SGCEO43556 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 RN7SL600P-201ENST00000581811 299 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AP003117.1-201ENST00000602771 554 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.52□□□□□ -1.85
SGCEO43556 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.52□□□□□ -1.85
SGCEO43556 MIR6748-201ENST00000610433 71 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AL136295.6-201ENST00000610486 658 ntBASIC3.52□□□□□ -1.85
SGCEO43556 MIR6716-201ENST00000613413 80 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AC008121.2-201ENST00000614647 523 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AC092628.2-201ENST00000622492 339 ntBASIC3.52□□□□□ -1.85
SGCEO43556 AC090506.2-201ENST00000624521 419 ntBASIC3.52□□□□□ -1.85
SGCEO43556 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.52□□□□□ -1.85
SGCEO43556 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SGCEO43556 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SGCEO43556 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SGCEO43556 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 RPS26P8-201ENST00000393490 348 ntBASIC3.51□□□□□ -1.85
SGCEO43556 HMGB3P19-201ENST00000403971 560 ntBASIC3.51□□□□□ -1.85
SGCEO43556 SNORA11B-201ENST00000408175 129 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AC105402.1-201ENST00000413336 545 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AC004022.2-201ENST00000413824 193 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.51□□□□□ -1.85
SGCEO43556 HMGB1P32-201ENST00000425971 565 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.51□□□□□ -1.85
SGCEO43556 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.51□□□□□ -1.85
SGCEO43556 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 AL627224.1-201ENST00000448334 444 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.51□□□□□ -1.85
SGCEO43556 HMGB1P26-201ENST00000452520 628 ntBASIC3.51□□□□□ -1.85
SGCEO43556 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SGCEO43556 HMGB3P30-201ENST00000457863 606 ntBASIC3.51□□□□□ -1.85
SGCEO43556 RPL31P61-201ENST00000496160 376 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.51□□□□□ -1.85
SGCEO43556 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.51□□□□□ -1.85
SGCEO43556 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.51□□□□□ -1.85
SGCEO43556 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.51□□□□□ -1.85
SGCEO43556 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.51□□□□□ -1.85
SGCEO43556 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.51□□□□□ -1.85
SGCEO43556 AL592436.1-201ENST00000605135 558 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AC006338.2-201ENST00000616864 791 ntBASIC3.51□□□□□ -1.85
SGCEO43556 AC124312.6-202ENST00000623624 418 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms