Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHB1Q9Y5F3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDHB1Q9Y5F3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PCDHB1Q9Y5F3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 U3.3-201ENST00000362986 216 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RNA5SP90-201ENST00000364801 99 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 CYCSP45-201ENST00000402289 315 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RPL21P67-201ENST00000402896 478 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 PRRC2CP1-201ENST00000404428 159 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC016397.1-201ENST00000412463 242 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC009238.2-201ENST00000431026 355 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 B3GNT2P1-201ENST00000434960 952 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RPS29P10-201ENST00000439197 166 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 Z92846.1-201ENST00000456203 268 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RPS29P33-201ENST00000456717 146 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RPS15AP1-201ENST00000457423 391 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 FTH1P2-201ENST00000466086 412 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 CEACAMP10-202ENST00000495431 496 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RPS4XP20-201ENST00000505751 772 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 LTV1P1-201ENST00000510683 1237 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 GTF2F2P1-201ENST00000511083 675 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RNU6-202P-201ENST00000515998 96 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 Y_RNA.695-201ENST00000516715 107 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 RNA5SP230-201ENST00000517039 122 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 SOD1P3-201ENST00000518682 454 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC137768.1-201ENST00000549998 553 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC073544.2-201ENST00000601155 540 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC123786.2-201ENST00000603459 275 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AL731566.2-201ENST00000618971 317 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC068792.1-201ENST00000621354 417 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHB1Q9Y5F3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 CASC19-221ENST00000641309 1382 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC104623.2-202ENST00000623477 4002 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC083843.2-201ENST00000568248 6253 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC016716.1-201ENST00000265882 708 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 PRELID3BP11-201ENST00000414230 479 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 COX6CP2-201ENST00000444980 225 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 RPL10P17-201ENST00000453852 316 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC112206.1-201ENST00000468416 477 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 IGLV2-34-201ENST00000490007 283 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 RN7SL591P-201ENST00000496150 292 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC010424.1-201ENST00000506336 297 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.16□□□□□ -1.58
PCDHB1Q9Y5F3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms