Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 FXYD5-205ENST00000423817 892 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL831784.1-201ENST00000427302 373 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MTND6P12-201ENST00000428247 522 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC007365.2-201ENST00000428806 458 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL035398.1-201ENST00000430869 322 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HMGB3P24-201ENST00000433260 622 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL590128.1-201ENST00000433407 286 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 Z97634.1-203ENST00000435229 471 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC239367.1-201ENST00000439389 936 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL353813.1-201ENST00000440700 253 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RPSAP40-201ENST00000442343 891 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RUSC1-AS1-201ENST00000443642 679 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 C11orf98P1-201ENST00000446114 318 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TSSK1A-201ENST00000450724 768 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 DEFA10P-201ENST00000455014 288 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 Z92846.1-201ENST00000456203 268 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 NPAP1P2-201ENST00000456716 1234 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 snoU13.11-201ENST00000459219 104 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL607P-201ENST00000461220 299 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL419P-201ENST00000471592 287 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL400P-201ENST00000473634 296 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RPS27AP1-201ENST00000475545 471 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL294P-201ENST00000477271 295 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL586P-201ENST00000479137 296 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RPL7AP9-201ENST00000484287 800 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL800P-201ENST00000484823 280 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL159P-201ENST00000485164 292 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 DPH3P1-201ENST00000486648 249 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL584P-201ENST00000492309 297 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 IGKV1-5-201ENST00000496168 532 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC073861.1-201ENST00000496294 459 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 Y_RNA.689-201ENST00000516589 107 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC139365.1-201ENST00000519417 322 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC022679.1-201ENST00000522559 496 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TAGLN2P1-201ENST00000524097 587 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 NDUFA3P2-201ENST00000531434 232 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC004801.5-201ENST00000552958 550 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005476.1-201ENST00000554427 397 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC008915.1-201ENST00000561624 837 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC026826.3-201ENST00000561747 158 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR5692A1-201ENST00000580523 69 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 RN7SL155P-201ENST00000581538 263 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 NOS2P4-201ENST00000582696 205 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CD160-204ENST00000584442 219 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR2467-201ENST00000584559 81 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CEACAM8-202ENST00000599005 544 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC009158.1-202ENST00000609586 242 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HOXB13-AS1_2.1-201ENST00000612962 81 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR6124-201ENST00000617177 85 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR941-5-201ENST00000621667 72 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC106872.12-201ENST00000622170 547 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC092135.2-201ENST00000624702 506 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC135068.9-201ENST00000628927 355 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR4275-201ENST00000636486 87 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MIR941-3-201ENST00000637366 72 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 U6.101-201ENST00000637707 76 ntBASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC106774.9-201ENST00000638668 597 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-4Q9BYR3 CPEB1-AS1-202ENST00000618020 2994 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms