Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 MIR6715A-201ENST00000615929 79 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 BMS1P21-201ENST00000634565 365 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
IFT140Q96RY7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT140Q96RY7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
IFT140Q96RY7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
IFT140Q96RY7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
IFT140Q96RY7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
IFT140Q96RY7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 OR5AW1P-201ENST00000426334 1006 ntBASIC5.86□□□□□ -1.47
IFT140Q96RY7 AC109925.1-201ENST00000478069 331 ntBASIC5.86□□□□□ -1.47
IFT140Q96RY7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
IFT140Q96RY7 AL121603.1-201ENST00000553815 142 ntBASIC5.86□□□□□ -1.47
IFT140Q96RY7 HMGN2P47-201ENST00000559378 272 ntBASIC5.86□□□□□ -1.47
IFT140Q96RY7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 AC104984.5-201ENST00000586878 94 ntBASIC5.86□□□□□ -1.47
IFT140Q96RY7 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
IFT140Q96RY7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
IFT140Q96RY7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 FTLP6-201ENST00000355274 422 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 AC093698.1-201ENST00000423843 571 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 AC011742.1-201ENST00000431448 434 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 MAPRE1P3-201ENST00000435438 796 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 AC010486.1-201ENST00000511793 424 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 RPL12P22-201ENST00000519073 490 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 AC087276.1-201ENST00000529659 480 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
IFT140Q96RY7 TRAV15-201ENST00000556680 249 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
IFT140Q96RY7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
IFT140Q96RY7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 MAPK10-253ENST00000641010 4072 ntBASIC5.85□□□□□ -1.47
IFT140Q96RY7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
IFT140Q96RY7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
IFT140Q96RY7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 RPL5P18-201ENST00000406671 891 ntBASIC5.84□□□□□ -1.47
IFT140Q96RY7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 NPM1P39-201ENST00000449818 867 ntBASIC5.84□□□□□ -1.47
IFT140Q96RY7 RNU6-579P-201ENST00000516879 102 ntBASIC5.84□□□□□ -1.47
IFT140Q96RY7 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 AC127502.3-201ENST00000636170 1206 ntBASIC5.84□□□□□ -1.47
IFT140Q96RY7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
IFT140Q96RY7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.84□□□□□ -1.47
IFT140Q96RY7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
IFT140Q96RY7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 CYP4A43P-201ENST00000568156 121 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC068254.2-201ENST00000623938 3577 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
IFT140Q96RY7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 RNU4-47P-201ENST00000410876 114 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 DYNLL1P7-201ENST00000429273 258 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC006028.1-201ENST00000438379 402 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC099563.1-201ENST00000456086 418 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC138409.2-202ENST00000507274 458 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC109458.1-201ENST00000508858 316 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 FCF1P8-201ENST00000510322 597 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 AC138932.5-201ENST00000617759 563 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 AL590240.3-201ENST00000621416 943 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 OR5AC4P-202ENST00000642086 985 ntBASIC5.83□□□□□ -1.48
IFT140Q96RY7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
IFT140Q96RY7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT140Q96RY7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT140Q96RY7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT140Q96RY7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms