Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AL035423.1-201ENST00000420331 213 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC006480.1-201ENST00000449887 378 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AL358832.1-201ENST00000497800 389 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC244505.7-201ENST00000599675 272 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC073869.7-201ENST00000640874 297 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 MTCO1P12-201ENST00000414273 1543 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC092111.2-201ENST00000611627 1414 ntBASIC5.17□□□□□ -1.58
CCDC7Q96M83 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC7Q96M83 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 HMGB1P16-201ENST00000447155 540 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC026427.2-201ENST00000506228 536 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 RFPL4AP5-201ENST00000514977 504 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 RN7SKP18-201ENST00000516005 275 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 MIR5195-201ENST00000583555 115 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 NAMPTP1-201ENST00000440465 2514 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC7Q96M83 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 RNU4-44P-201ENST00000363050 141 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 RNU6-1331P-201ENST00000363658 106 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 PPIAP3-201ENST00000450588 505 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 RN7SKP83-201ENST00000516512 178 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 MIR3922-201ENST00000585192 84 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 VN1R92P-201ENST00000598511 928 ntBASIC5.16□□□□□ -1.58
CCDC7Q96M83 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC7Q96M83 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.15□□□□□ -1.58
CCDC7Q96M83 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC7Q96M83 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
CCDC7Q96M83 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CCDC7Q96M83 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC7Q96M83 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CCDC7Q96M83 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC7Q96M83 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC7Q96M83 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AC009229.4-201ENST00000623854 1947 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 RNU6-283P-201ENST00000364788 107 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 SNORA11.2-201ENST00000408318 127 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 AC098592.2-201ENST00000413158 265 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 AC096644.3-201ENST00000416788 338 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 VN1R31P-201ENST00000417498 730 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 HMGB3P20-201ENST00000417997 600 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AL034379.1-201ENST00000423216 253 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 SETD6P1-201ENST00000444575 317 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 RPS6P4-201ENST00000494693 758 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.15□□□□□ -1.59
CCDC7Q96M83 AP000553.6-201ENST00000641242 118 ntBASIC5.15□□□□□ -1.59
CCDC7Q96M83 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC7Q96M83 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
CCDC7Q96M83 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC7Q96M83 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC7Q96M83 AC011503.2-201ENST00000594230 1500 ntBASIC5.14□□□□□ -1.59
CCDC7Q96M83 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC7Q96M83 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC7Q96M83 RNVU1-14-201ENST00000384770 164 ntBASIC5.14□□□□□ -1.59
CCDC7Q96M83 RPS7P15-201ENST00000415804 584 ntBASIC5.14□□□□□ -1.59
CCDC7Q96M83 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC7Q96M83 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC7Q96M83 AC005726.1-201ENST00000494679 427 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms