Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 RNA5SP208-201ENST00000516156 78 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 RNA5SP341-201ENST00000516261 117 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC008694.2-201ENST00000517591 306 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 LARP7P3-201ENST00000579888 337 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AP001153.1-201ENST00000641024 338 ntBASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC168Q8NDH2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC168Q8NDH2 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 GSTA8P-201ENST00000404253 637 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 ZNF807-201ENST00000328088 1707 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 MIR1261-201ENST00000408659 82 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 RPL21P110-201ENST00000433345 446 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AC092747.2-201ENST00000545069 983 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AC084036.1-201ENST00000609190 508 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AP000553.6-201ENST00000641242 118 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AC006504.1-201ENST00000562493 3666 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 NAMPTP1-201ENST00000440465 2514 ntBASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC168Q8NDH2 HSPA8P19-201ENST00000505359 1517 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 VDAC1P9-201ENST00000412766 841 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC093698.1-201ENST00000423843 571 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 MTND6P32-201ENST00000457611 483 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AP002884.2-201ENST00000471647 395 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 RAC1P2-201ENST00000511164 579 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC113192.3-201ENST00000529152 742 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 NPM1P5-201ENST00000557228 838 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AL034351.1-201ENST00000605288 668 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC010480.1-201ENST00000624823 684 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 BX323014.1-201ENST00000412876 237 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 ATP5HP2-201ENST00000433885 485 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 HMGB3P9-201ENST00000441799 583 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 RPS4XP18-201ENST00000495480 763 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 PHBP14-201ENST00000512887 367 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 OR4A12P-201ENST00000530847 918 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC022968.1-201ENST00000567372 442 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 SNORA62.6-201ENST00000606322 83 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC234782.5-201ENST00000617723 324 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AP003485.2-201ENST00000623636 610 ntBASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC168Q8NDH2 SAMMSON-213ENST00000641336 1521 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms