Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AGGF1P4-201ENST00000568249 801 ntBASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC068020.1-201ENST00000594215 661 ntBASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AL031985.2-201ENST00000600955 480 ntBASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AL163642.2-201ENST00000604722 1019 ntBASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 FAM25E-202ENST00000608562 189 ntBASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC122133.1-201ENST00000613964 233 ntBASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ZNF549Q6P9A3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AP000526.1-201ENST00000603308 1388 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 MTND5P29-201ENST00000458676 1807 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 FAM3C2-201ENST00000312214 681 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 VDAC1P9-201ENST00000412766 841 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 TAF13P2-201ENST00000416876 286 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 NPM1P22-201ENST00000427761 952 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 YWHAZP7-201ENST00000436906 631 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL645937.3-201ENST00000453647 936 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC092324.1-201ENST00000468671 324 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 CCDC75P1-201ENST00000469247 791 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 SYPL1P1-201ENST00000473622 768 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 ARL4AP1-201ENST00000503220 705 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC113347.3-201ENST00000509113 148 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 OR5H4P-201ENST00000510851 923 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC011352.1-201ENST00000512300 793 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC010198.2-201ENST00000550612 259 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 PCNPP1-201ENST00000552501 511 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC090181.2-201ENST00000602975 672 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL592148.2-201ENST00000612210 372 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC139769.3-201ENST00000618383 175 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 VN1R7P-201ENST00000619242 903 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AC091931.1-201ENST00000623488 728 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 VN2R3P-201ENST00000422626 1412 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 AP001273.1-201ENST00000624493 3152 ntBASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF549Q6P9A3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 IL6STP1-201ENST00000346911 1020 ntBASIC4.52□□□□□ -1.69
ZNF549Q6P9A3 RN7SKP115-201ENST00000363177 317 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms