Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RNU6-839P-201ENST00000363347 108 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 SNORA70.2-201ENST00000364506 135 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RNU1-74P-201ENST00000384108 171 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RNA5SP332-201ENST00000391063 115 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 MIR298-201ENST00000401212 88 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 TRGV6-201ENST00000417928 299 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 TIMM9P2-201ENST00000419324 266 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RPL18P10-201ENST00000425606 538 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AL593851.1-201ENST00000426171 157 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 Z93242.1-201ENST00000427102 353 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC005345.1-201ENST00000431868 217 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 USP9YP22-201ENST00000438971 294 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RAB11AP1-201ENST00000442978 646 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 TPMTP4-201ENST00000450749 678 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC073387.1-201ENST00000453261 709 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AL133477.1-201ENST00000457472 514 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC021660.1-201ENST00000465006 554 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 VPS26AP1-201ENST00000483197 979 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC026979.1-201ENST00000492525 396 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC010350.1-201ENST00000504908 231 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 MTCYBP16-201ENST00000509187 1129 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC048346.1-201ENST00000510247 144 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 RNU6-885P-201ENST00000516607 104 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC022360.1-201ENST00000521058 340 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 ATP5J2P6-201ENST00000565203 266 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC103987.3-201ENST00000582071 292 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AL512782.1-201ENST00000603093 364 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC121761.2-201ENST00000617300 689 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC091932.2-201ENST00000623014 291 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 MIR4278-201ENST00000636094 69 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 AC126323.6-202ENST00000568092 3511 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 SAMMSON-226ENST00000642089 1582 ntBASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC44A4Q53GD3 STX3-208ENST00000641815 3236 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 BMS1P3-201ENST00000372011 932 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC068538.1-201ENST00000376856 336 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 RPS3AP23-201ENST00000401762 784 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AF186996.5-201ENST00000418098 904 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC004074.1-201ENST00000421810 1063 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 USP9YP31-201ENST00000431405 881 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AL359265.2-201ENST00000434367 631 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 TMX2P1-201ENST00000436507 708 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms