Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RN7SKP46-201ENST00000515942 234 ntBASIC4.77□□□□□ -1.65
COL16A1Q07092 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.77□□□□□ -1.65
COL16A1Q07092 AC005476.1-201ENST00000554427 397 ntBASIC4.77□□□□□ -1.65
COL16A1Q07092 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.77□□□□□ -1.65
COL16A1Q07092 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.77□□□□□ -1.65
COL16A1Q07092 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.77□□□□□ -1.65
COL16A1Q07092 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.77□□□□□ -1.65
COL16A1Q07092 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
COL16A1Q07092 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.77□□□□□ -1.65
COL16A1Q07092 TUG1_1.1-201ENST00000610654 145 ntBASIC4.77□□□□□ -1.65
COL16A1Q07092 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.77□□□□□ -1.65
COL16A1Q07092 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
COL16A1Q07092 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL16A1Q07092 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL16A1Q07092 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL16A1Q07092 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL16A1Q07092 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL16A1Q07092 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
COL16A1Q07092 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL16A1Q07092 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL16A1Q07092 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.76□□□□□ -1.65
COL16A1Q07092 HMGN2P27-201ENST00000427352 270 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.76□□□□□ -1.65
COL16A1Q07092 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.76□□□□□ -1.65
COL16A1Q07092 UBE2V2P4-201ENST00000447495 259 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 VN1R40P-201ENST00000455196 941 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 NPM1P28-201ENST00000492269 840 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.76□□□□□ -1.65
COL16A1Q07092 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.76□□□□□ -1.65
COL16A1Q07092 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 MIR4472-2-201ENST00000582069 67 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 AC107308.1-201ENST00000615897 301 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.76□□□□□ -1.65
COL16A1Q07092 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL16A1Q07092 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL16A1Q07092 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 UBE3AP2-201ENST00000429033 2259 ntBASIC4.76□□□□□ -1.65
COL16A1Q07092 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
COL16A1Q07092 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL16A1Q07092 RNU1-18P-201ENST00000363062 164 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.75□□□□□ -1.65
COL16A1Q07092 AC011742.1-201ENST00000431448 434 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 HMGB3P9-201ENST00000441799 583 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 COX6B1P6-201ENST00000522347 255 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 IGHV3-29-201ENST00000604817 344 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 AC099654.11-201ENST00000638857 294 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 AC112198.2-201ENST00000426589 6996 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL16A1Q07092 MFSD8-233ENST00000641482 4860 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL16A1Q07092 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL16A1Q07092 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
COL16A1Q07092 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL16A1Q07092 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL16A1Q07092 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL16A1Q07092 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL16A1Q07092 RPS3AP43-201ENST00000479743 781 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.75□□□□□ -1.65
COL16A1Q07092 AC110794.1-201ENST00000505816 425 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.75□□□□□ -1.65
COL16A1Q07092 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.75□□□□□ -1.65
COL16A1Q07092 AC103881.1-201ENST00000603476 538 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 AP003392.5-201ENST00000607857 415 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 AC006213.4-201ENST00000616184 634 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 AP003355.3-201ENST00000623465 114 ntBASIC4.75□□□□□ -1.65
COL16A1Q07092 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL16A1Q07092 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL16A1Q07092 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL16A1Q07092 Z83843.1-201ENST00000604070 3685 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL16A1Q07092 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.74□□□□□ -1.65
COL16A1Q07092 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 MIR422A-201ENST00000362286 90 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 NPM1P37-201ENST00000403105 874 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.74□□□□□ -1.65
COL16A1Q07092 AC093755.1-201ENST00000512950 1023 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 RFPL4AP5-201ENST00000514977 504 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL16A1Q07092 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 LSM3P2-201ENST00000551246 273 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 AL133247.2-201ENST00000603236 482 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 AC026979.4-201ENST00000606555 645 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 AC009464.1-201ENST00000615731 469 ntBASIC4.74□□□□□ -1.65
COL16A1Q07092 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
COL16A1Q07092 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.74□□□□□ -1.65
COL16A1Q07092 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL16A1Q07092 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
COL16A1Q07092 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL16A1Q07092 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms