Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HMGB3P19-201ENST00000403971 560 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC114814.2-201ENST00000419195 485 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RPS15AP6-201ENST00000420703 385 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RPL31P12-201ENST00000422587 358 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 NPM1P24-201ENST00000428039 894 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC069277.2-201ENST00000454211 432 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RPL23AP44-201ENST00000482216 473 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC091167.1-201ENST00000492017 396 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RPL5P23-201ENST00000496040 868 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC026784.1-201ENST00000507986 352 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 ARL2BPP6-201ENST00000512757 439 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 PHBP14-201ENST00000512887 367 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RNU2-58P-201ENST00000516403 183 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 SNORA31.9-201ENST00000516429 84 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 CDH12P4-201ENST00000517835 295 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 CDH12P3-201ENST00000517935 295 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 CDH12P1-201ENST00000518435 295 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RAB9BP1-201ENST00000519581 626 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC092747.2-201ENST00000545069 983 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC106785.3-201ENST00000564064 847 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC023575.1-201ENST00000580510 358 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 SNX6P1-201ENST00000601728 1224 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 AC008745.1-201ENST00000604064 271 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 MIR7151-201ENST00000617477 60 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 PWAR6-201ENST00000552334 4618 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 OR6C69P-201ENST00000394268 893 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 HSPE1P26-201ENST00000405341 275 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC002075.2-201ENST00000425207 252 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 RPL18P10-201ENST00000425606 538 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 SKP1P1-201ENST00000438081 489 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 RANP8-201ENST00000444720 713 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 TPT1P13-201ENST00000449760 499 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC006463.2-201ENST00000473326 348 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC023050.1-201ENST00000498198 304 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AP004242.1-201ENST00000533701 349 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 MIR4284-201ENST00000578924 81 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AC007448.1-201ENST00000582714 234 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 MIR4443-201ENST00000585052 53 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AL133247.2-201ENST00000603236 482 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AL365503.1-201ENST00000605247 905 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 MIR6868-201ENST00000611215 58 ntBASIC2.97□□□□□ -1.93
HIST1H1AQ02539 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HIST1H1AQ02539 AP002001.2-201ENST00000529025 1469 ntBASIC2.96□□□□□ -1.93
HIST1H1AQ02539 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.93
HIST1H1AQ02539 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HIST1H1AQ02539 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HIST1H1AQ02539 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 MIR937-201ENST00000401271 86 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 RPS27AP11-201ENST00000402798 447 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 TPT1P2-201ENST00000413105 503 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 LIPT1P1-201ENST00000415870 1186 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.96□□□□□ -1.94
HIST1H1AQ02539 OR5AW1P-201ENST00000426334 1006 ntBASIC2.96□□□□□ -1.94
HIST1H1AQ02539 MRPL50P1-201ENST00000431951 384 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms