Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL590290.1-201ENST00000405336 380 ntBASIC3.71□□□□□ -1.82
LMO4P61968 ATF1P1-201ENST00000406040 927 ntBASIC3.71□□□□□ -1.82
LMO4P61968 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.71□□□□□ -1.82
LMO4P61968 RPS3AP37-201ENST00000419176 745 ntBASIC3.71□□□□□ -1.82
LMO4P61968 MFSD13B-201ENST00000420133 1290 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL513175.2-201ENST00000422071 443 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL158073.1-201ENST00000426848 1104 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL589823.1-201ENST00000429577 183 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.71□□□□□ -1.82
LMO4P61968 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.71□□□□□ -1.82
LMO4P61968 TDGF1P1-201ENST00000445734 527 ntBASIC3.71□□□□□ -1.82
LMO4P61968 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 PTMAP3-201ENST00000447474 330 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.71□□□□□ -1.82
LMO4P61968 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.71□□□□□ -1.82
LMO4P61968 DHFRP3-201ENST00000455595 559 ntBASIC3.71□□□□□ -1.82
LMO4P61968 ATG12P2-201ENST00000456830 416 ntBASIC3.71□□□□□ -1.82
LMO4P61968 RPL7P32-201ENST00000457119 744 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.71□□□□□ -1.82
LMO4P61968 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.71□□□□□ -1.82
LMO4P61968 AL161747.1-201ENST00000480068 358 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC011037.1-201ENST00000483964 558 ntBASIC3.71□□□□□ -1.82
LMO4P61968 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.71□□□□□ -1.82
LMO4P61968 AC091951.3-201ENST00000504093 246 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.71□□□□□ -1.82
LMO4P61968 RFPL4AP5-201ENST00000514977 504 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC010306.1-201ENST00000523223 1117 ntBASIC3.71□□□□□ -1.82
LMO4P61968 LRRC6P1-201ENST00000532188 885 ntBASIC3.71□□□□□ -1.82
LMO4P61968 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 POLR2KP1-201ENST00000553226 168 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.71□□□□□ -1.82
LMO4P61968 BPIFA4P-203ENST00000603168 689 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC121247.2-201ENST00000604776 136 ntBASIC3.71□□□□□ -1.82
LMO4P61968 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 AC011374.2-201ENST00000607135 526 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AC007349.4-201ENST00000608114 532 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL360219.1-201ENST00000610230 366 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL392048.1-201ENST00000613946 534 ntBASIC3.71□□□□□ -1.82
LMO4P61968 RMST_10.1-201ENST00000616309 154 ntBASIC3.71□□□□□ -1.82
LMO4P61968 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 AC092608.3-201ENST00000625017 386 ntBASIC3.71□□□□□ -1.82
LMO4P61968 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.71□□□□□ -1.82
LMO4P61968 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 AC010300.1-201ENST00000600671 5134 ntBASIC3.71□□□□□ -1.82
LMO4P61968 RNF6P1-201ENST00000444889 1784 ntBASIC3.71□□□□□ -1.82
LMO4P61968 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LMO4P61968 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LMO4P61968 AC104454.1-201ENST00000421341 1401 ntBASIC3.7□□□□□ -1.82
LMO4P61968 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
LMO4P61968 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LMO4P61968 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LMO4P61968 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.7□□□□□ -1.82
LMO4P61968 AC008033.1-201ENST00000216407 1162 ntBASIC3.7□□□□□ -1.82
LMO4P61968 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LMO4P61968 RNU6-146P-201ENST00000384602 108 ntBASIC3.7□□□□□ -1.82
LMO4P61968 MIR3065-201ENST00000390137 79 ntBASIC3.7□□□□□ -1.82
LMO4P61968 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 SFR1P1-201ENST00000403720 688 ntBASIC3.7□□□□□ -1.82
LMO4P61968 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 VTA1P1-201ENST00000414044 866 ntBASIC3.7□□□□□ -1.82
LMO4P61968 SNRPFP1-201ENST00000414761 252 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL008987.1-201ENST00000415528 237 ntBASIC3.7□□□□□ -1.82
LMO4P61968 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.7□□□□□ -1.82
LMO4P61968 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 AL139095.3-201ENST00000419672 1203 ntBASIC3.7□□□□□ -1.82
LMO4P61968 GTF2IP2-201ENST00000424290 697 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL365396.1-201ENST00000430854 671 ntBASIC3.7□□□□□ -1.82
LMO4P61968 RPS20P1-201ENST00000434853 354 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.7□□□□□ -1.82
LMO4P61968 RPL7P29-201ENST00000437151 728 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.7□□□□□ -1.82
LMO4P61968 ACTR3P2-201ENST00000439585 1257 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 NUTF2P3-201ENST00000448540 384 ntBASIC3.7□□□□□ -1.82
LMO4P61968 TPMTP4-201ENST00000450749 678 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AL133217.1-201ENST00000450980 425 ntBASIC3.7□□□□□ -1.82
LMO4P61968 RN7SL41P-201ENST00000476144 297 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC091167.1-201ENST00000492017 396 ntBASIC3.7□□□□□ -1.82
LMO4P61968 AC023424.1-201ENST00000496058 459 ntBASIC3.7□□□□□ -1.82
LMO4P61968 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.7□□□□□ -1.82
LMO4P61968 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.7□□□□□ -1.82
LMO4P61968 AC034244.1-201ENST00000507687 207 ntBASIC3.7□□□□□ -1.82
LMO4P61968 HMGB3P16-201ENST00000508037 287 ntBASIC3.7□□□□□ -1.82
LMO4P61968 MRPS33P3-201ENST00000513456 322 ntBASIC3.7□□□□□ -1.82
LMO4P61968 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.7□□□□□ -1.82
LMO4P61968 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.7□□□□□ -1.82
LMO4P61968 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms