Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 RNU6-1257P-201ENST00000384625 110 ntBASIC4.44□□□□□ -1.7
LHX1P48742 RNU6-1000P-201ENST00000391066 106 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.44□□□□□ -1.7
LHX1P48742 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
LHX1P48742 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 UBE2V1P9-201ENST00000414760 368 ntBASIC4.44□□□□□ -1.7
LHX1P48742 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 GTF2IP2-201ENST00000424290 697 ntBASIC4.44□□□□□ -1.7
LHX1P48742 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 DYNLL1P7-201ENST00000429273 258 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 PRELID3BP10-201ENST00000431957 584 ntBASIC4.44□□□□□ -1.7
LHX1P48742 HSFY6P-201ENST00000445573 403 ntBASIC4.44□□□□□ -1.7
LHX1P48742 FCF1P6-201ENST00000456841 595 ntBASIC4.44□□□□□ -1.7
LHX1P48742 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LHX1P48742 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.44□□□□□ -1.7
LHX1P48742 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.44□□□□□ -1.7
LHX1P48742 TCP11X3P-202ENST00000514289 1254 ntBASIC4.44□□□□□ -1.7
LHX1P48742 HMGB1P1-201ENST00000522557 636 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.44□□□□□ -1.7
LHX1P48742 AC063950.1-201ENST00000552036 308 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 AC095057.3-201ENST00000567102 1157 ntBASIC4.44□□□□□ -1.7
LHX1P48742 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 AC010735.1-201ENST00000567305 1026 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AC022655.2-201ENST00000577280 318 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.44□□□□□ -1.7
LHX1P48742 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.44□□□□□ -1.7
LHX1P48742 AC115085.1-201ENST00000588924 229 ntBASIC4.44□□□□□ -1.7
LHX1P48742 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 AF129408.1-201ENST00000608767 431 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.44□□□□□ -1.7
LHX1P48742 MIR7702-201ENST00000621931 59 ntBASIC4.44□□□□□ -1.7
LHX1P48742 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.44□□□□□ -1.7
LHX1P48742 ATE1-AS1-202ENST00000636460 506 ntBASIC4.44□□□□□ -1.7
LHX1P48742 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LHX1P48742 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LHX1P48742 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 RNU1-13P-201ENST00000384499 162 ntBASIC4.43□□□□□ -1.7
LHX1P48742 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 RPS24P12-201ENST00000402084 394 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AL356967.1-201ENST00000406305 431 ntBASIC4.43□□□□□ -1.7
LHX1P48742 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.43□□□□□ -1.7
LHX1P48742 AL356095.1-201ENST00000417217 199 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC073069.1-201ENST00000428657 441 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC011242.1-201ENST00000433596 1158 ntBASIC4.43□□□□□ -1.7
LHX1P48742 RPS7P2-201ENST00000435134 607 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.43□□□□□ -1.7
LHX1P48742 FABP5P3-201ENST00000437960 408 ntBASIC4.43□□□□□ -1.7
LHX1P48742 GSTA7P-201ENST00000438425 448 ntBASIC4.43□□□□□ -1.7
LHX1P48742 RPL23AP89-201ENST00000439324 255 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.43□□□□□ -1.7
LHX1P48742 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.43□□□□□ -1.7
LHX1P48742 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 RPS4XP6-201ENST00000477670 797 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC113430.1-201ENST00000506872 718 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.43□□□□□ -1.7
LHX1P48742 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LHX1P48742 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.43□□□□□ -1.7
LHX1P48742 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.43□□□□□ -1.7
LHX1P48742 CYB5AP5-201ENST00000549779 389 ntBASIC4.43□□□□□ -1.7
LHX1P48742 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.43□□□□□ -1.7
LHX1P48742 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.43□□□□□ -1.7
LHX1P48742 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.43□□□□□ -1.7
LHX1P48742 AC023825.1-201ENST00000566704 1030 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC090751.1-201ENST00000566966 267 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC018552.3-201ENST00000567416 561 ntBASIC4.43□□□□□ -1.7
LHX1P48742 MIR3160-1-201ENST00000577972 85 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AP000919.1-202ENST00000581139 1264 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AP002906.1-201ENST00000603405 233 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC026979.4-201ENST00000606555 645 ntBASIC4.43□□□□□ -1.7
LHX1P48742 RNU4-89P-201ENST00000607443 133 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC024933.1-201ENST00000608472 348 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC124016.2-201ENST00000610058 665 ntBASIC4.43□□□□□ -1.7
LHX1P48742 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LHX1P48742 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.43□□□□□ -1.7
LHX1P48742 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LHX1P48742 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LHX1P48742 CASC19-261ENST00000641853 1638 ntBASIC4.43□□□□□ -1.7
LHX1P48742 AC116667.1-201ENST00000604855 2072 ntBASIC4.42□□□□□ -1.7
LHX1P48742 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.42□□□□□ -1.7
LHX1P48742 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LHX1P48742 PHKBP1-201ENST00000450951 1951 ntBASIC4.42□□□□□ -1.7
LHX1P48742 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms