Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CAPN3P20807 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.67□□□□□ -1.66
CAPN3P20807 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CAPN3P20807 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.67□□□□□ -1.66
CAPN3P20807 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.66□□□□□ -1.66
CAPN3P20807 NEAT1-202ENST00000501122 22743 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
CAPN3P20807 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CAPN3P20807 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 RN7SKP104-201ENST00000362605 328 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 RN7SKP44-201ENST00000363602 316 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 RNU1-130P-201ENST00000363930 160 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 RNU4-51P-201ENST00000364206 140 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 MIR708-201ENST00000390708 88 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.66□□□□□ -1.66
CAPN3P20807 GJA6P-201ENST00000415117 1042 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 AC092832.1-201ENST00000422934 400 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 Z93242.1-201ENST00000427102 353 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.66□□□□□ -1.66
CAPN3P20807 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.66□□□□□ -1.66
CAPN3P20807 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 RPL23AP16-201ENST00000441715 421 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 RPL34P20-201ENST00000442771 351 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 KNOP1P3-201ENST00000446933 426 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 OR52J1P-201ENST00000450596 932 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 TRBV26-201ENST00000456572 344 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 MTCO3P2-201ENST00000457365 171 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.66□□□□□ -1.66
CAPN3P20807 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 AC093752.1-206ENST00000511823 336 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.66□□□□□ -1.66
CAPN3P20807 AP001189.2-201ENST00000527320 189 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AC136624.4-201ENST00000573044 370 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.66□□□□□ -1.66
CAPN3P20807 MIR4270-201ENST00000581799 70 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AC103792.1-201ENST00000603591 919 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AL121652.1-201ENST00000608851 448 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 AC112694.2-201ENST00000623697 768 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 AC117529.2-201ENST00000512159 2068 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 ZNF734P-201ENST00000419494 1534 ntBASIC4.66□□□□□ -1.66
CAPN3P20807 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CAPN3P20807 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.66□□□□□ -1.66
CAPN3P20807 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CAPN3P20807 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.65□□□□□ -1.66
CAPN3P20807 AC008758.3-201ENST00000507003 1829 ntBASIC4.65□□□□□ -1.66
CAPN3P20807 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CAPN3P20807 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CAPN3P20807 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.65□□□□□ -1.66
CAPN3P20807 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.66
CAPN3P20807 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CAPN3P20807 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CAPN3P20807 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CAPN3P20807 OR4A15-201ENST00000314706 1035 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 RNU6-492P-201ENST00000363035 104 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 MIR217-201ENST00000384817 110 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 MIR23A-201ENST00000385245 73 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 RNU6-1300P-201ENST00000391046 108 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CAPN3P20807 RSL24D1P1-201ENST00000404972 493 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CAPN3P20807 RNA5SP239-201ENST00000410218 129 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.65□□□□□ -1.67
CAPN3P20807 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.65□□□□□ -1.67
CAPN3P20807 C1DP1-201ENST00000426049 402 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 AC004938.1-201ENST00000438468 308 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 RPS26P2-201ENST00000440331 348 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CAPN3P20807 AC092647.2-201ENST00000452998 253 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 NDUFA12P1-201ENST00000455914 406 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.65□□□□□ -1.67
CAPN3P20807 AC091153.1-201ENST00000466297 402 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CAPN3P20807 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.65□□□□□ -1.67
CAPN3P20807 RPS4XP18-201ENST00000495480 763 ntBASIC4.65□□□□□ -1.67
CAPN3P20807 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CAPN3P20807 TMEM248P1-201ENST00000510579 951 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms