Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC017007.4-201ENST00000503353 1352 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 SNORA60-201ENST00000362396 134 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 SNORA56-201ENST00000383966 129 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL121834.1-202ENST00000404494 277 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 RNU2-6P-201ENST00000411404 190 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 HMGB3P31-201ENST00000413333 595 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 MTND2P15-201ENST00000418575 892 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AP000942.1-201ENST00000463969 747 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL035404.1-201ENST00000497982 568 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 HMGB1P23-201ENST00000518743 568 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC022968.1-201ENST00000567372 442 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 MIR4284-201ENST00000578924 81 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 RN7SL600P-201ENST00000581811 299 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC012254.4-201ENST00000588843 273 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 OR2BH1P-201ENST00000608850 864 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 MLECP1-201ENST00000615893 709 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 RMST_10.1-201ENST00000616309 154 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AL445567.2-201ENST00000618935 498 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC124312.6-202ENST00000623624 418 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AC016717.3-201ENST00000624730 554 ntBASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.31□□□□□ -1.88
IGHV3-43DP0DP04 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC074029.4-201ENST00000624796 1859 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 NOL8P1-201ENST00000508336 3529 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC100871.1-201ENST00000507871 1456 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AL049737.1-201ENST00000413920 1403 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC007529.1-201ENST00000418574 2178 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RNU4-27P-201ENST00000410889 139 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RN7SKP33-201ENST00000410942 340 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RNU2-72P-201ENST00000411175 163 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RNA5SP39-201ENST00000411245 120 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC016712.1-201ENST00000431088 378 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AL512661.1-201ENST00000434586 1253 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RPS7P5-201ENST00000441482 581 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AL451050.1-201ENST00000450126 415 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 RN7SL860P-201ENST00000473738 223 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC026726.1-201ENST00000512859 601 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC027338.1-201ENST00000514840 825 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 MRPL49P2-201ENST00000521066 465 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC008562.1-201ENST00000521763 330 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC022790.1-201ENST00000522872 204 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC104229.1-201ENST00000561364 255 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC069366.1-201ENST00000583159 838 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 OR1AB1P-201ENST00000585564 761 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC006116.5-201ENST00000591936 559 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AC092474.3-201ENST00000603022 568 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 ABI1P1-201ENST00000603375 1120 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 MIR6868-201ENST00000611215 58 ntBASIC3.3□□□□□ -1.88
IGHV3-43DP0DP04 AL512506.1-201ENST00000613918 449 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms