Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 OR5BE1P-201ENST00000425977 939 ntBASIC3.55□□□□□ -1.84
SGCEO43556 ELOCP6-201ENST00000429066 328 ntBASIC3.55□□□□□ -1.84
SGCEO43556 VDAC1P6-201ENST00000430062 855 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.55□□□□□ -1.84
SGCEO43556 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.55□□□□□ -1.84
SGCEO43556 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
SGCEO43556 AC023512.1-201ENST00000444513 499 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.55□□□□□ -1.84
SGCEO43556 CEACAMP4-201ENST00000457676 421 ntBASIC3.55□□□□□ -1.84
SGCEO43556 ELOCP12-201ENST00000458706 328 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.55□□□□□ -1.84
SGCEO43556 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.55□□□□□ -1.84
SGCEO43556 AC010285.3-201ENST00000511668 676 ntBASIC3.55□□□□□ -1.84
SGCEO43556 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.55□□□□□ -1.84
SGCEO43556 IGKV2-23-201ENST00000518729 323 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.55□□□□□ -1.84
SGCEO43556 MIR3939-201ENST00000582614 106 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AC128687.2-201ENST00000609657 566 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AL445423.1-201ENST00000609941 536 ntBASIC3.55□□□□□ -1.84
SGCEO43556 MLECP1-201ENST00000615893 709 ntBASIC3.55□□□□□ -1.84
SGCEO43556 MIR7151-201ENST00000617477 60 ntBASIC3.55□□□□□ -1.84
SGCEO43556 OR5BE1P-202ENST00000641168 1176 ntBASIC3.55□□□□□ -1.84
SGCEO43556 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SGCEO43556 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.55□□□□□ -1.84
SGCEO43556 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.55□□□□□ -1.84
SGCEO43556 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SGCEO43556 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.54□□□□□ -1.84
SGCEO43556 ENSAP1-201ENST00000392855 326 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.54□□□□□ -1.84
SGCEO43556 RPL31P45-201ENST00000419532 356 ntBASIC3.54□□□□□ -1.84
SGCEO43556 USP12PY-201ENST00000427677 1064 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC016712.1-201ENST00000431088 378 ntBASIC3.54□□□□□ -1.84
SGCEO43556 MRPL50P1-201ENST00000431951 384 ntBASIC3.54□□□□□ -1.84
SGCEO43556 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.54□□□□□ -1.84
SGCEO43556 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.54□□□□□ -1.84
SGCEO43556 VN1R25P-201ENST00000443385 738 ntBASIC3.54□□□□□ -1.84
SGCEO43556 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.54□□□□□ -1.84
SGCEO43556 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.54□□□□□ -1.84
SGCEO43556 VN1R40P-201ENST00000455196 941 ntBASIC3.54□□□□□ -1.84
SGCEO43556 RPL30P11-201ENST00000495304 339 ntBASIC3.54□□□□□ -1.84
SGCEO43556 SNX5P1-201ENST00000505757 1041 ntBASIC3.54□□□□□ -1.84
SGCEO43556 SNORA31.9-201ENST00000516429 84 ntBASIC3.54□□□□□ -1.84
SGCEO43556 Vault.1-201ENST00000516474 102 ntBASIC3.54□□□□□ -1.84
SGCEO43556 RNU6-1004P-201ENST00000516584 111 ntBASIC3.54□□□□□ -1.84
SGCEO43556 MRPL49P2-201ENST00000521066 465 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 CYCSP29-201ENST00000533731 318 ntBASIC3.54□□□□□ -1.84
SGCEO43556 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.54□□□□□ -1.84
SGCEO43556 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 GNRHR2P1-201ENST00000555315 631 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.54□□□□□ -1.84
SGCEO43556 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.54□□□□□ -1.84
SGCEO43556 AF230666.2-201ENST00000602328 725 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC090525.3-201ENST00000605601 189 ntBASIC3.54□□□□□ -1.84
SGCEO43556 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.54□□□□□ -1.84
SGCEO43556 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 AP000255.1-201ENST00000610276 676 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC012531.5-201ENST00000611375 151 ntBASIC3.54□□□□□ -1.84
SGCEO43556 AC005962.2-201ENST00000611427 652 ntBASIC3.54□□□□□ -1.84
SGCEO43556 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.54□□□□□ -1.84
SGCEO43556 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SGCEO43556 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SGCEO43556 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SGCEO43556 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
SGCEO43556 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 RNU6-670P-201ENST00000364312 104 ntBASIC3.53□□□□□ -1.84
SGCEO43556 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 CCNB2P1-201ENST00000399411 1150 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 AL031736.2-201ENST00000426573 787 ntBASIC3.53□□□□□ -1.84
SGCEO43556 ARF4P2-201ENST00000430209 526 ntBASIC3.53□□□□□ -1.84
SGCEO43556 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
SGCEO43556 TPTE2P3-201ENST00000441562 1189 ntBASIC3.53□□□□□ -1.84
SGCEO43556 YWHAQP9-201ENST00000445891 512 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 MTND2P8-201ENST00000450555 1025 ntBASIC3.53□□□□□ -1.84
SGCEO43556 OR7L1P-201ENST00000456181 380 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AC010618.1-201ENST00000469924 477 ntBASIC3.53□□□□□ -1.84
SGCEO43556 NDUFA5P9-201ENST00000472609 340 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AL049830.2-201ENST00000480072 201 ntBASIC3.53□□□□□ -1.84
SGCEO43556 FTH1P24-201ENST00000503502 462 ntBASIC3.53□□□□□ -1.84
SGCEO43556 MTATP6P22-201ENST00000507369 598 ntBASIC3.53□□□□□ -1.84
SGCEO43556 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 IGBP1P5-201ENST00000507524 1000 ntBASIC3.53□□□□□ -1.84
SGCEO43556 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SGCEO43556 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.53□□□□□ -1.84
SGCEO43556 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.53□□□□□ -1.84
SGCEO43556 MTND1P6-201ENST00000523621 946 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms