Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 RNA5SP312-201ENST00000517068 116 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRTM2O43300 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRTM2O43300 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRTM2O43300 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRTM2O43300 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRTM2O43300 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LRRTM2O43300 MTND4LP24-201ENST00000572277 291 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRTM2O43300 AC006130.2-201ENST00000586202 326 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.07□□□□□ -1.76
LRRTM2O43300 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 AP002360.3-201ENST00000607673 710 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRTM2O43300 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LRRTM2O43300 AL356863.1-201ENST00000623378 1080 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
LRRTM2O43300 AC105074.1-201ENST00000623380 3095 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LRRTM2O43300 ZNF90P1-201ENST00000480493 1951 ntBASIC4.07□□□□□ -1.76
LRRTM2O43300 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.07□□□□□ -1.76
LRRTM2O43300 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LRRTM2O43300 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 MAPK10-253ENST00000641010 4072 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LRRTM2O43300 SNORA62.3-201ENST00000365110 153 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 MIR670-201ENST00000390142 98 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 RNA5SP171-201ENST00000391071 115 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 ATP5F1P3-201ENST00000397213 657 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL590290.1-201ENST00000405336 380 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 VN1R8P-201ENST00000407739 893 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 RN7SKP202-201ENST00000410439 330 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL158825.1-201ENST00000414735 521 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL121882.1-201ENST00000422893 417 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AC006946.1-201ENST00000429106 328 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL132765.1-201ENST00000434165 553 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AL353093.1-201ENST00000441292 436 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 HSFY6P-201ENST00000445573 403 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 RPL23AP23-201ENST00000452590 471 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 MTND2P39-201ENST00000457230 764 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC079804.1-201ENST00000461922 436 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AC107398.1-201ENST00000486904 505 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC104629.1-201ENST00000494226 508 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AP002812.1-201ENST00000495378 474 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 AC098799.3-201ENST00000506095 438 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 MTND5P21-201ENST00000531961 522 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.06□□□□□ -1.76
LRRTM2O43300 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.06□□□□□ -1.76
LRRTM2O43300 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AC015911.5-201ENST00000587076 451 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC005255.1-201ENST00000593748 216 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 PCNAP1-202ENST00000595299 752 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AC010201.1-201ENST00000605051 540 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AC099676.1-201ENST00000608886 657 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AP001033.2-201ENST00000609701 1003 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.06□□□□□ -1.76
LRRTM2O43300 AP004607.9-201ENST00000618202 316 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 AC106858.1-201ENST00000637497 429 ntBASIC4.06□□□□□ -1.76
LRRTM2O43300 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
LRRTM2O43300 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
LRRTM2O43300 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
LRRTM2O43300 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
LRRTM2O43300 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRTM2O43300 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.05□□□□□ -1.76
LRRTM2O43300 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LRRTM2O43300 XIAPP3-201ENST00000312918 795 ntBASIC4.05□□□□□ -1.76
LRRTM2O43300 RNU6-650P-201ENST00000365658 111 ntBASIC4.05□□□□□ -1.76
LRRTM2O43300 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRRTM2O43300 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LRRTM2O43300 MIR513A2-201ENST00000385249 127 ntBASIC4.05□□□□□ -1.76
LRRTM2O43300 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms