Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC121161.1-201ENST00000510606 652 ntBASIC4.49□□□□□ -1.69
O00370 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
O00370 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
O00370 AC090281.1-201ENST00000523019 276 ntBASIC4.49□□□□□ -1.69
O00370 AC104115.2-201ENST00000523026 687 ntBASIC4.49□□□□□ -1.69
O00370 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.49□□□□□ -1.69
O00370 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.49□□□□□ -1.69
O00370 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.49□□□□□ -1.69
O00370 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
O00370 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.49□□□□□ -1.69
O00370 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.49□□□□□ -1.69
O00370 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.49□□□□□ -1.69
O00370 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.49□□□□□ -1.69
O00370 MIR432-201ENST00000606207 94 ntBASIC4.49□□□□□ -1.69
O00370 AC064801.1-201ENST00000612025 407 ntBASIC4.49□□□□□ -1.69
O00370 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.49□□□□□ -1.69
O00370 AL138955.1-201ENST00000622881 1040 ntBASIC4.49□□□□□ -1.69
O00370 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.49□□□□□ -1.69
O00370 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.49□□□□□ -1.69
O00370 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
O00370 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
O00370 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
O00370 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
O00370 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
O00370 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
O00370 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 MTCO1P4-201ENST00000520516 1409 ntBASIC4.48□□□□□ -1.69
O00370 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
O00370 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.48□□□□□ -1.69
O00370 AC018555.1-201ENST00000567548 1980 ntBASIC4.48□□□□□ -1.69
O00370 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 OR6C69P-201ENST00000394268 893 ntBASIC4.48□□□□□ -1.69
O00370 FABP12P1-201ENST00000401911 322 ntBASIC4.48□□□□□ -1.69
O00370 UBE2V1P11-201ENST00000411559 285 ntBASIC4.48□□□□□ -1.69
O00370 AL158825.1-201ENST00000414735 521 ntBASIC4.48□□□□□ -1.69
O00370 RWDD4P2-201ENST00000426392 563 ntBASIC4.48□□□□□ -1.69
O00370 AC005189.1-201ENST00000431286 310 ntBASIC4.48□□□□□ -1.69
O00370 BTF3P10-201ENST00000433415 495 ntBASIC4.48□□□□□ -1.69
O00370 RPL21P133-201ENST00000443666 476 ntBASIC4.48□□□□□ -1.69
O00370 MTND2P8-201ENST00000450555 1025 ntBASIC4.48□□□□□ -1.69
O00370 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 AC109327.1-201ENST00000471666 403 ntBASIC4.48□□□□□ -1.69
O00370 UQCRHP4-201ENST00000471686 272 ntBASIC4.48□□□□□ -1.69
O00370 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 CYCSP20-201ENST00000473154 315 ntBASIC4.48□□□□□ -1.69
O00370 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.48□□□□□ -1.69
O00370 CAB39P1-201ENST00000502277 460 ntBASIC4.48□□□□□ -1.69
O00370 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.48□□□□□ -1.69
O00370 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.48□□□□□ -1.69
O00370 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 RNU5A-7P-201ENST00000515979 116 ntBASIC4.48□□□□□ -1.69
O00370 AP003355.1-201ENST00000518956 587 ntBASIC4.48□□□□□ -1.69
O00370 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.48□□□□□ -1.69
O00370 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
O00370 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.48□□□□□ -1.69
O00370 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.48□□□□□ -1.69
O00370 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.48□□□□□ -1.69
O00370 OR4U1P-201ENST00000554958 912 ntBASIC4.48□□□□□ -1.69
O00370 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.48□□□□□ -1.69
O00370 TVP23BP1-201ENST00000557500 617 ntBASIC4.48□□□□□ -1.69
O00370 KPNA2P3-201ENST00000584190 848 ntBASIC4.48□□□□□ -1.69
O00370 AC005962.2-201ENST00000611427 652 ntBASIC4.48□□□□□ -1.69
O00370 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.48□□□□□ -1.69
O00370 AL445567.2-201ENST00000618935 498 ntBASIC4.48□□□□□ -1.69
O00370 AL731566.2-201ENST00000618971 317 ntBASIC4.48□□□□□ -1.69
O00370 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.48□□□□□ -1.69
O00370 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
O00370 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
O00370 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.48□□□□□ -1.69
O00370 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
O00370 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.47□□□□□ -1.69
O00370 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
O00370 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
O00370 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
O00370 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
O00370 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.47□□□□□ -1.69
O00370 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
O00370 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.47□□□□□ -1.69
O00370 AL035405.1-201ENST00000400795 710 ntBASIC4.47□□□□□ -1.69
O00370 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.47□□□□□ -1.69
O00370 AC008173.1-201ENST00000418901 264 ntBASIC4.47□□□□□ -1.69
O00370 C4BPAP2-201ENST00000428434 478 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms