Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 CEACAMP8-201ENST00000413902 580 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 ELOCP6-201ENST00000429066 328 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL7P4-203ENST00000430239 730 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 FABP5P3-201ENST00000437960 408 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 ELOCP12-201ENST00000458706 328 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC018635.1-201ENST00000468292 1030 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC092902.1-201ENST00000486999 259 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 OR5H3P-201ENST00000502817 919 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC016550.1-201ENST00000505348 785 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP249-201ENST00000516127 99 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 HMGB1P1-201ENST00000522557 636 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AP000916.1-201ENST00000533869 835 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC006130.2-201ENST00000586202 326 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AL158196.1-201ENST00000616786 434 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 MIR8059-201ENST00000620427 81 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC068880.4-201ENST00000623082 495 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC067931.1-201ENST00000624190 671 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC092608.3-201ENST00000625017 386 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 OR8B1P-202ENST00000641132 1178 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AC104446.1-201ENST00000613728 1321 ntBASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHGA1Q9Y5H4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 SPRR2C-201ENST00000290702 219 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AL078604.1-201ENST00000404609 466 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 SNORA11F-201ENST00000408237 128 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 RNA5SP239-201ENST00000410218 129 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 BX664727.1-201ENST00000416024 466 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 E2F6P2-201ENST00000420708 748 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 FGF7P3-201ENST00000454645 303 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC008379.1-201ENST00000463655 464 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 RPS20P21-201ENST00000466859 343 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC041039.1-201ENST00000485656 536 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 TPT1P3-201ENST00000492841 512 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC108475.1-201ENST00000507880 950 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC112206.4-201ENST00000515142 405 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SKP46-201ENST00000515942 234 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 MIR4429-201ENST00000580105 73 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC012254.4-201ENST00000588843 273 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC022916.3-201ENST00000592961 742 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 MTATP6P2-201ENST00000603319 678 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC026741.1-201ENST00000605892 482 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC099676.1-201ENST00000608886 657 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC112503.2-201ENST00000609005 552 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC096586.1-201ENST00000610267 561 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 VN1R9P-201ENST00000614184 867 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC099669.2-201ENST00000616549 437 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AC018926.3-201ENST00000618841 406 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AP000943.4-201ENST00000622912 357 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 AL590396.2-201ENST00000636511 1041 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA1Q9Y5H4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
PCDHGA1Q9Y5H4 SCN1A-220ENST00000641603 12506 ntBASIC4.33□□□□□ -1.72
PCDHGA1Q9Y5H4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA1Q9Y5H4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA1Q9Y5H4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDHGA1Q9Y5H4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms