Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 OR5H4P-201ENST00000510851 923 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AC010486.3-201ENST00000511602 785 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AC008837.2-201ENST00000513076 418 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 TCP11X3P-202ENST00000514289 1254 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 RNA5SP464-201ENST00000516251 108 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 RNU6-347P-201ENST00000516658 105 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 AL390726.5-202ENST00000564800 256 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 RN7SL652P-201ENST00000577769 300 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AP005262.1-201ENST00000582646 997 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 AP003973.1-201ENST00000604639 691 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 FAM25E-202ENST00000608562 189 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AL360219.1-201ENST00000610230 366 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 MIR6853-201ENST00000619642 74 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 AC004777.1-201ENST00000624317 287 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKP3Q9Y446 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PKP3Q9Y446 AC022031.1-201ENST00000585985 2593 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PKP3Q9Y446 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
PKP3Q9Y446 DCAF13P3-201ENST00000561147 1334 ntBASIC4.71□□□□□ -1.66
PKP3Q9Y446 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 TAF9BP1-201ENST00000396646 746 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 MIR298-201ENST00000401212 88 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 GSTM3P2-201ENST00000412746 530 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 NRBF2P2-201ENST00000413087 861 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 OR6C64P-201ENST00000419708 825 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 MRPS36P1-201ENST00000421291 307 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 RPL7P57-201ENST00000423238 740 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 FABP7P1-201ENST00000424004 391 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 MTND1P32-201ENST00000433043 938 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 RPL10P17-201ENST00000453852 316 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AL133477.1-201ENST00000457472 514 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 AC112206.1-201ENST00000468416 477 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 RN7SL346P-201ENST00000491561 294 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 RPL5P23-201ENST00000496040 868 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 MRPS33P3-201ENST00000513456 322 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 RNU6-1129P-201ENST00000515964 104 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 RNU2-30P-201ENST00000516209 141 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 IGKV1-32-201ENST00000519290 311 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AP000619.3-201ENST00000535634 1127 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AL390816.3-201ENST00000604527 1066 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 AC121761.2-201ENST00000617300 689 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 AP001784.1-201ENST00000624107 428 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.7□□□□□ -1.66
PKP3Q9Y446 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 MAPK10-286ENST00000641208 8747 ntBASIC4.7□□□□□ -1.66
PKP3Q9Y446 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PKP3Q9Y446 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PKP3Q9Y446 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PKP3Q9Y446 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.69□□□□□ -1.66
PKP3Q9Y446 LINC01355-201ENST00000566551 5444 ntBASIC4.69□□□□□ -1.66
PKP3Q9Y446 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
PKP3Q9Y446 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 AC092162.3-201ENST00000624511 1624 ntBASIC4.69□□□□□ -1.66
PKP3Q9Y446 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.69□□□□□ -1.66
PKP3Q9Y446 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PKP3Q9Y446 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.69□□□□□ -1.66
PKP3Q9Y446 RNU6-839P-201ENST00000363347 108 ntBASIC4.69□□□□□ -1.66
PKP3Q9Y446 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKP3Q9Y446 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms