Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 AC019072.1-201ENST00000604535 1551 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 RNU6-252P-201ENST00000363232 107 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 AC010385.1-201ENST00000412374 256 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 EIF1P3-201ENST00000423841 334 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 AL049634.3-201ENST00000604968 457 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 OR2BH1P-201ENST00000608850 864 ntBASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC7.78□□□□□ -1.16
SHROOM4Q9ULL8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 RPL21P17-201ENST00000397467 475 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AL159987.2-201ENST00000432754 307 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC104978.1-201ENST00000449387 391 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 RPS11P1-201ENST00000451072 473 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC090151.1-201ENST00000520784 730 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC079610.2-201ENST00000604818 690 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 MIR7975-201ENST00000619350 68 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 SAMMSON-213ENST00000641336 1521 ntBASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC7.77□□□□□ -1.17
SHROOM4Q9ULL8 RNU6-304P-201ENST00000364855 107 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 CYCSP32-201ENST00000440548 321 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 MTND1P36-201ENST00000522384 936 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 CYCSP30-201ENST00000546447 172 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 AC068714.1-201ENST00000559623 800 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 AC037471.2-201ENST00000564941 598 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 AC114878.2-201ENST00000604863 1251 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 AC083843.2-201ENST00000568248 6253 ntBASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SHROOM4Q9ULL8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 MTND5P11-201ENST00000511037 1812 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 MIR1179-201ENST00000408703 91 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 NPM1P28-201ENST00000492269 840 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 HMGN1P15-201ENST00000513870 295 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 MIR5684-201ENST00000585074 65 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC022106.2-201ENST00000620114 757 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC019278.1-201ENST00000623516 479 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AL034408.1-202ENST00000636088 415 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 EOGT-210ENST00000615922 1931 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 UBE2V1P11-201ENST00000411559 285 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 OR5BE1P-201ENST00000425977 939 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC074250.1-201ENST00000511117 192 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC113192.3-201ENST00000529152 742 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 UBTFL9-201ENST00000534504 1148 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 PSMA6P4-201ENST00000603247 718 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AC005000.2-201ENST00000605468 310 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 AL158211.2-201ENST00000607282 395 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 U3.45-201ENST00000607547 219 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 OR5BE1P-202ENST00000641168 1176 ntBASIC7.75□□□□□ -1.17
SHROOM4Q9ULL8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SHROOM4Q9ULL8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms