Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL132765.1-201ENST00000434165 553 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 ARL4AP3-201ENST00000441452 574 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 Z73417.1-201ENST00000447373 778 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 TPT1P12-201ENST00000448968 492 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RPL23AP81-201ENST00000455252 467 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RPL21P131-201ENST00000497298 483 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC002456.2-201ENST00000509356 380 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AP003730.1-201ENST00000524605 285 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AP001636.2-201ENST00000525517 696 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC099786.3-201ENST00000565735 1410 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC011477.5-201ENST00000586571 259 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC002487.1-201ENST00000604565 994 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 MIR6716-201ENST00000613413 80 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL138721.1-201ENST00000616756 179 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL356274.1-201ENST00000617064 410 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AC073569.3-201ENST00000619055 682 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 AL023881.1-201ENST00000621088 301 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 MTND2P41-201ENST00000637599 773 ntBASIC4.59□□□□□ -1.67
SIX4Q9UIU6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.59□□□□□ -1.67
SIX4Q9UIU6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.59□□□□□ -1.68
SIX4Q9UIU6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SIX4Q9UIU6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
SIX4Q9UIU6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 RNA5SP27-201ENST00000363839 119 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 SNORD65C-201ENST00000390962 71 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 HMGB3P18-201ENST00000406327 590 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 KRR1P1-201ENST00000419430 803 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 RSL24D1P6-201ENST00000426934 401 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 BTF3P10-201ENST00000433415 495 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 MTCO2P20-201ENST00000437339 673 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 CR769776.1-201ENST00000441254 787 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 NUTF2P3-201ENST00000448540 384 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 OR51B8P-201ENST00000449892 769 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 ZNF886P-201ENST00000450781 723 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 RPL10P17-201ENST00000453852 316 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AL133244.1-201ENST00000456007 258 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 NDUFS5P6-201ENST00000529136 295 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC100770.1-201ENST00000532310 322 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 OR4U1P-201ENST00000554958 912 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC008751.2-201ENST00000597885 980 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 IPO5P1-202ENST00000600039 287 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AL049844.2-201ENST00000604280 628 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC097065.2-201ENST00000608159 533 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.58□□□□□ -1.68
SIX4Q9UIU6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SIX4Q9UIU6 AC022079.1-201ENST00000621546 602 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms